DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RIKLHQE
Uniprot ID:
P18031
Source protein:
Tyrosine-protein phosphatase non-receptor type 1
Source gene:
PTPN1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
56:62
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.934
ASA_SCORE:
73.1
COIL:
0.642
CONS_SCORE:
0.5708
DSS_SCORE:
0.3844
HELIX:
0.0301
FCONS_SCORE:
0.7844
RIG_SCORE:
0.7442
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A69T
TCGA-A5-A0G2
UCEC
TCGA
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.1389
p.A69T
DO41235
UCEC
ICGC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.1389
p.Y46H
TCGA-AA-3713
COAD
TCGA
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.5
p.Y46H
DO8400
COAD
ICGC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.5
p.P51L
TCGA-B5-A3FC
UCEC
TCGA
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.1944
p.P51L
DO41871
UCEC
ICGC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.1944
p.D48Y
TCGA-CA-6717
COAD
TCGA
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.1111
p.D48Y
DO8264
COAD
ICGC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.1111
p.D53H
TCGA-DK-AA77
BLCA
TCGA
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.25
p.D64Y
DO228952
LICA
ICGC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.2778
p.D64Y
DO229026
LICA
ICGC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.2778
p.E57K
DO219219
LUSC
ICGC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.7022
p.I61V
DO41235
UCEC
ICGC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.7076
p.A69D
SIDM01146
Gastric Carcinoma
GDSC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.1389
p.A69D
ACH-000932
Gastric Cancer
CCLE
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.1389
p.A69D
NCI-SNU-1
stomach
COSMIC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.1389
p.I57V
SIDM01133
Other Solid Cancers
GDSC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.5965
p.I57V
ACH-002177
Lung Cancer
CCLE
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.5965
p.I57V
NCI-H835
lung
COSMIC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.5965
p.P51S
SIDM00991
T-Lymphoblastic Leukemia
GDSC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.1944
p.P51S
ACH-000519
Leukemia
CCLE
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.1944
p.P51T
ACH-001701
Head and Neck Cancer
CCLE
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.1944
p.K55N
NCI-H1838
lung
COSMIC
RIKLHQE
LIG_APCC_ABBAyCdc20_2
0.75
Drug responses associated with PTPN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RIKLHQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P18031
Tyrosine-protein phosphatase non-receptor type 1
LIG_APCC_ABBAyCdc20_2
56:62
RIKLHQE
APC,CDC20,FZR1
0.934
More...