DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RKDMYND
Uniprot ID:
Q96PU8
Source protein:
Protein quaking
Source gene:
QKI
Class:
LIG_APCC_ABBAyCdc20_2
Location:
53:59
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7262
ASA_SCORE:
89.8429
COIL:
0.3266
CONS_SCORE:
0.4951
DSS_SCORE:
0.3898
HELIX:
0.6639
FCONS_SCORE:
0.8498
RIG_SCORE:
0.7865
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R53W
TCGA-AJ-A3EK
UCEC
TCGA
RKDMYND
LIG_APCC_ABBAyCdc20_2
0.8634
p.R53W
DO41584
UCEC
ICGC
RKDMYND
LIG_APCC_ABBAyCdc20_2
0.8634
p.D59Y
DO229031
LICA
ICGC
RKDMYND
LIG_APCC_ABBAyCdc20_2
0.7325
p.G63V
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
RKDMYND
LIG_APCC_ABBAyCdc20_2
0.2222
p.G63V
ACH-000945
Lung Cancer
CCLE
RKDMYND
LIG_APCC_ABBAyCdc20_2
0.2222
p.G63V
NCI-H650
lung
COSMIC
RKDMYND
LIG_APCC_ABBAyCdc20_2
0.2222
p.R43Q
SIDM00363
Acute Myeloid Leukemia
GDSC
RKDMYND
LIG_APCC_ABBAyCdc20_2
0.0556
p.R43Q
ACH-000770
Leukemia
CCLE
RKDMYND
LIG_APCC_ABBAyCdc20_2
0.0556
p.R43Q
P31-FUJ
haematopoietic_and_lymphoid_tissue
COSMIC
RKDMYND
LIG_APCC_ABBAyCdc20_2
0.0556
Drug responses associated with QKI mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKDMYND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96PU8
Protein quaking
LIG_APCC_ABBAyCdc20_2
53:59
RKDMYND
APC,CDC20,FZR1
0.7262
More...