DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RKENF
Uniprot ID:
Q8TC05
Source protein:
Nuclear protein MDM1
Source gene:
MDM1
Class:
DEG_APCC_KENBOX_2
Location:
706:710
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5277
ASA_SCORE:
99.5
COIL:
0.3268
CONS_SCORE:
0.3417
DSS_SCORE:
0.6219
HELIX:
0.6722
FCONS_SCORE:
0.9911
RIG_SCORE:
0.7543
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E708D
TCGA-AA-3977
COAD
TCGA
RKENF
DEG_APCC_KENBOX_2
0.6758
p.E708D
DO8730
COAD
ICGC
RKENF
DEG_APCC_KENBOX_2
0.6758
p.K707N
TCGA-BG-A222
UCEC
TCGA
RKENF
DEG_APCC_KENBOX_2
0.6918
p.K707N
DO42977
UCEC
ICGC
RKENF
DEG_APCC_KENBOX_2
0.6918
p.R706M
TCGA-E6-A1LX
UCEC
TCGA
RKENF
DEG_APCC_KENBOX_2
0.7521
p.R706M
DO41020
UCEC
ICGC
RKENF
DEG_APCC_KENBOX_2
0.7521
p.L700V
TCGA-GM-A2D9
BRCA
TCGA
RKENF
DEG_APCC_KENBOX_2
0.1667
p.L700V
DO4810
BRCA
ICGC
RKENF
DEG_APCC_KENBOX_2
0.1667
p.A696D
DO229041
LICA
ICGC
RKENF
DEG_APCC_KENBOX_2
0.0556
Drug responses associated with MDM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKENF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TC05
Nuclear protein MDM1
DEG_APCC_KENBOX_2
706:710
RKENF
APC,CDC20,FZR1
0.5277
More...