DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RKHLFSE
Uniprot ID:
Q5T4T6
Source protein:
Synaptonemal complex protein 2-like
Source gene:
SYCP2L
Class:
LIG_APCC_ABBAyCdc20_2
Location:
501:507
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9617
ASA_SCORE:
114.1429
COIL:
0.6736
CONS_SCORE:
0.4508
DSS_SCORE:
0.6254
HELIX:
0.2489
FCONS_SCORE:
1.2615
RIG_SCORE:
0.7025
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K497N
TCGA-A5-A2K5
UCEC
TCGA
RKHLFSE
LIG_APCC_ABBAyCdc20_2
0.3333
p.F505L
TCGA-AA-3984
COAD
TCGA
RKHLFSE
LIG_APCC_ABBAyCdc20_2
0.6981
p.F505L
DO9002
COAD
ICGC
RKHLFSE
LIG_APCC_ABBAyCdc20_2
0.6981
p.K502T
TCGA-B5-A11E
UCEC
TCGA
RKHLFSE
LIG_APCC_ABBAyCdc20_2
0.6195
p.P496L
TCGA-DU-6407
LGG
TCGA
RKHLFSE
LIG_APCC_ABBAyCdc20_2
0.1944
p.P496L
DO22295
LGG
ICGC
RKHLFSE
LIG_APCC_ABBAyCdc20_2
0.1944
p.D511Y
DO222884
COCA
ICGC
RKHLFSE
LIG_APCC_ABBAyCdc20_2
0.2222
p.P493L
DO233234
GACA
ICGC
RKHLFSE
LIG_APCC_ABBAyCdc20_2
0.1111
p.S515I
DO228948
LICA
ICGC
RKHLFSE
LIG_APCC_ABBAyCdc20_2
0.1111
Drug responses associated with SYCP2L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKHLFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T4T6
Synaptonemal complex protein 2-like
LIG_APCC_ABBAyCdc20_2
501:507
RKHLFSE
APC,CDC20,FZR1
0.9617
More...