DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
RKRLHKD
Uniprot ID:
Q5TIE3
Source protein:
von Willebrand factor A domain-containing protein 5B1
Source gene:
VWA5B1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
327:333
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5919
ASA_SCORE:
104.6286
COIL:
0.5881
CONS_SCORE:
0.5739
DSS_SCORE:
0.3862
HELIX:
0.2724
FCONS_SCORE:
1.0427
RIG_SCORE:
0.7618
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R327Q
TCGA-A5-A2K5
UCEC
TCGA
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.7329
p.R327Q
TCGA-AX-A0J0
UCEC
TCGA
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.7329
p.R329C
TCGA-EA-A439
CESC
TCGA
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.719
p.R329C
SIDM02049
Pancreatic Carcinoma
GDSC
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.719
p.S317T
DO225023
BRCA
ICGC
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.0556
p.Q326E
DO2216
BRCA
ICGC
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.3056
p.A338S
DO229029
LICA
ICGC
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.1944
p.D336Y
DO229025
LICA
ICGC
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.25
p.S341L
DO42849
UCEC
ICGC
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.1111
p.K339N
DO41379
UCEC
ICGC
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.1667
p.R321W
SIDM00858
Osteosarcoma
GDSC
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.1667
p.R321W
ACH-000082
bone
CCLE
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.1667
p.R321W
G-292_Clone_A141B1
bone
COSMIC
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.1667
p.P335T
SIDM01205
Acute Myeloid Leukemia
GDSC
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.2778
p.P335T
ACH-002314
Leukemia
CCLE
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.2778
p.P335T
TUR
haematopoietic_and_lymphoid_tissue
COSMIC
RKRLHKD
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with VWA5B1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKRLHKD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5TIE3
von Willebrand factor A domain-containing protein 5B1
LIG_APCC_ABBAyCdc20_2
327:333
RKRLHKD
APC,CDC20,FZR1
0.5919
More...