DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RKSIFSE
Uniprot ID:
Q14134
Source protein:
Tripartite motif-containing protein 29
Source gene:
TRIM29
Class:
LIG_APCC_ABBAyCdc20_2
Location:
128:134
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.987
ASA_SCORE:
75.4857
COIL:
0.5749
CONS_SCORE:
0.7826
DSS_SCORE:
0.47
HELIX:
0.1666
FCONS_SCORE:
1.0018
RIG_SCORE:
0.7391
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A122D
TCGA-05-4396
LUAD
TCGA
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.1667
p.A122D
DO23838
LUAD
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.1667
p.R128C
TCGA-66-2768
LUSC
TCGA
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R128C
DO27216
LUSC
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.8301
p.P118H
TCGA-75-5146
LUAD
TCGA
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.0556
p.P118H
DO25228
LUAD
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.0556
p.E123K
TCGA-CA-6717
COAD
TCGA
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.1944
p.E123K
TCGA-Z2-A8RT
SKCM
TCGA
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.1944
p.E123K
DO8264
COAD
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.1944
p.E123K
DO51301
SKCM
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.1944
p.L127V
TCGA-D1-A15X
UCEC
TCGA
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.3056
p.L127V
DO43274
UCEC
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.3056
p.S133L
TCGA-DD-A73D
LIHC
TCGA
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.7667
p.S133L
DO48528
LIHC
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.7667
p.S133L
SIDM00781
Colorectal Carcinoma
GDSC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.7667
p.S133L
SIDM00780
Colorectal Carcinoma
GDSC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.7667
p.S133L
ACH-000967
Colon/Colorectal Cancer
CCLE
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.7667
p.S133L
ACH-001199
Colon/Colorectal Cancer
CCLE
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.7667
p.S133L
SNU-C2B
large_intestine
COSMIC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.7667
p.V119I
TCGA-EO-A22U
UCEC
TCGA
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V119I
DO43755
UCEC
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R136Q
TCGA-FR-A8YC
SKCM
TCGA
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.2778
p.R136Q
DO50301
SKCM
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.2778
p.R128H
TCGA-XK-AAIW
PRAD
TCGA
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.8244
p.R128H
DO51407
PRAD
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.8244
p.M143T
DO222905
BTCA
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.A120S
DO24227
LUAD
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.1111
p.G141W
DO26710
LUSC
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.5833
p.T120P
DO49418
PACA
ICGC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.1111
p.E119K
ACH-000204
Myeloma
CCLE
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.E119K
LP-1
haematopoietic_and_lymphoid_tissue
COSMIC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.N118S
ACH-002234
Head and Neck Cancer
CCLE
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.0556
p.N118S
DOK
upper_aerodigestive_tract
COSMIC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.0556
p.H136Y
IGR-37
skin
COSMIC
RKSIFSE
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with TRIM29 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKSIFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14134
Tripartite motif-containing protein 29
LIG_APCC_ABBAyCdc20_2
128:134
RKSIFSE
APC,CDC20,FZR1
0.987
More...