DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
RKSLFND
Uniprot ID:
Q99728
Source protein:
BRCA1-associated RING domain protein 1
Source gene:
BARD1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
129:135
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7491
ASA_SCORE:
101.1571
COIL:
0.7647
CONS_SCORE:
0.3178
DSS_SCORE:
0.5029
HELIX:
0.1867
FCONS_SCORE:
0.9681
RIG_SCORE:
0.731
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K140N
TCGA-AG-3892
READ
TCGA
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.3056
p.K140N
TCGA-AP-A056
UCEC
TCGA
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.3056
p.K140N
TCGA-BK-A6W3
UCEC
TCGA
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.3056
p.K140N
DO36394
READ
ICGC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.3056
p.K140N
DO50076
UCEC
ICGC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.3056
p.K140N
DO43971
UCEC
ICGC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.3056
p.N141T
TCGA-CA-6717
COAD
TCGA
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.1667
p.N141T
DO8264
COAD
ICGC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.1667
p.K124T
TCGA-DU-6392
LGG
TCGA
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.6389
p.K124T
DO22237
LGG
ICGC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.6389
p.V134F
DO223732
CESC
ICGC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.7068
p.E124K
DO50970
LICA
ICGC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.6389
p.E124K
DO232761
PBCA
ICGC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.6389
p.P137S
DO46801
PRAD
ICGC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.2778
p.S121P
SIDM00193
Colorectal Carcinoma
GDSC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.1111
p.S121P
ACH-000991
Colon/Colorectal Cancer
CCLE
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.1111
p.S121P
SNU-81
large_intestine
COSMIC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.1111
p.V135F
TGBC1TKB
biliary_tract
COSMIC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.7068
p.V144L
NCI-H1648
lung
COSMIC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.1944
p.G122A
NCI-H510A
lung
COSMIC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.1389
p.R123Q
HCC-56
large_intestine
COSMIC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.1667
p.T128N
EJM
haematopoietic_and_lymphoid_tissue
COSMIC
RKSLFND
LIG_APCC_ABBAyCdc20_2
0.3056
Drug responses associated with BARD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKSLFND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99728
BRCA1-associated RING domain protein 1
LIG_APCC_ABBAyCdc20_2
129:135
RKSLFND
APC,CDC20,FZR1
0.7491
More...