DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RLTIFDE
Uniprot ID:
Q53T59
Source protein:
HCLS1-binding protein 3
Source gene:
HS1BP3
Class:
LIG_APCC_ABBAyCdc20_2
Location:
227:233
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7373
ASA_SCORE:
83.3286
COIL:
0.7133
CONS_SCORE:
0.4227
DSS_SCORE:
0.5552
HELIX:
0.1919
FCONS_SCORE:
0.9712
RIG_SCORE:
0.7489
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R227W
TCGA-AA-A01R
COAD
TCGA
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.8634
p.R227W
DO7934
COAD
ICGC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.8634
p.E234D
TCGA-G4-6588
COAD
TCGA
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.3056
p.E234D
DO10140
COAD
ICGC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.3056
p.E239K
TCGA-UC-A7PG
CESC
TCGA
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.1667
p.E239K
DO51615
CESC
ICGC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.1667
p.A219V
DO233935
GACA
ICGC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.1111
p.D236E
DO229038
LICA
ICGC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.25
p.D236H
DO233293
NACA
ICGC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.25
p.G240R
DO233293
NACA
ICGC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.1389
p.P224S
DO229459
SKCA
ICGC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.25
p.P224L
SIDM01251
T-Cell Non-Hodgkin's Lymphoma
GDSC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.25
p.P224L
SIDM00753
Squamous Cell Lung Carcinoma
GDSC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.25
p.P224L
SIDM00910
Neuroblastoma
GDSC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.25
p.P224L
SIDM01059
Melanoma
GDSC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.25
p.P224L
SIDM01706
Hodgkin's Lymphoma
GDSC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.25
p.S225L
SIDM00312
Plasma Cell Myeloma
GDSC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.2778
p.S225L
SIDM01470
Acute Myeloid Leukemia
GDSC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.2778
p.S225L
ACH-000183
Myeloma
CCLE
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.2778
p.S225L
ACH-000387
Leukemia
CCLE
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.2778
p.S225L
L-363
haematopoietic_and_lymphoid_tissue
COSMIC
RLTIFDE
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with HS1BP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RLTIFDE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q53T59
HCLS1-binding protein 3
LIG_APCC_ABBAyCdc20_2
227:233
RLTIFDE
APC,CDC20,FZR1
0.7373
More...