DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RLVLYGE
Uniprot ID:
Q8IY21
Source protein:
Probable ATP-dependent RNA helicase DDX60
Source gene:
DDX60
Class:
LIG_APCC_ABBAyCdc20_2
Location:
975:981
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6013
ASA_SCORE:
62.6286
COIL:
0.4727
CONS_SCORE:
0.4247
DSS_SCORE:
0.1166
HELIX:
0.086
FCONS_SCORE:
1.2195
RIG_SCORE:
0.899
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V977L
TCGA-55-6979
LUAD
TCGA
RLVLYGE
LIG_APCC_ABBAyCdc20_2
0.5654
p.V977L
DO24110
LUAD
ICGC
RLVLYGE
LIG_APCC_ABBAyCdc20_2
0.5654
p.V990A
TCGA-FI-A2D5
UCEC
TCGA
RLVLYGE
LIG_APCC_ABBAyCdc20_2
0.0833
p.V990A
DO41331
UCEC
ICGC
RLVLYGE
LIG_APCC_ABBAyCdc20_2
0.0833
p.Q967K
DO229015
LICA
ICGC
RLVLYGE
LIG_APCC_ABBAyCdc20_2
0.1111
p.V974A
DO222702
MELA
ICGC
RLVLYGE
LIG_APCC_ABBAyCdc20_2
0.3056
p.R975T
SIDM01048
Plasma Cell Myeloma
GDSC
RLVLYGE
LIG_APCC_ABBAyCdc20_2
0.7876
p.R975T
ACH-000821
Myeloma
CCLE
RLVLYGE
LIG_APCC_ABBAyCdc20_2
0.7876
p.R975T
EJM
haematopoietic_and_lymphoid_tissue
COSMIC
RLVLYGE
LIG_APCC_ABBAyCdc20_2
0.7876
Drug responses associated with DDX60 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RLVLYGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IY21
Probable ATP-dependent RNA helicase DDX60
LIG_APCC_ABBAyCdc20_2
975:981
RLVLYGE
APC,CDC20,FZR1
0.6013
More...