DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RMKIFED
Uniprot ID:
Q5T764
Source protein:
Interferon-induced protein with tetratricopeptide repeats 1B
Source gene:
IFIT1B
Class:
LIG_APCC_ABBAyCdc20_2
Location:
368:374
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6539
ASA_SCORE:
95.2571
COIL:
0.8251
CONS_SCORE:
0.4972
DSS_SCORE:
0.2927
HELIX:
0.1593
FCONS_SCORE:
0.8931
RIG_SCORE:
0.8307
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E379D
TCGA-AP-A1DV
UCEC
TCGA
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.E379D
DO43186
UCEC
ICGC
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.R368H
TCGA-B5-A3FA
UCEC
TCGA
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.8244
p.R368H
TCGA-EI-6882
READ
TCGA
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.8244
p.R368H
DO36531
READ
ICGC
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.8244
p.R368H
DO52402
UCEC
ICGC
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.8244
p.R368H
SIDM00942
Oral Cavity Carcinoma
GDSC
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.8244
p.M369I
TCGA-BS-A0UF
UCEC
TCGA
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.6507
p.M369I
TCGA-CA-6717
COAD
TCGA
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.6507
p.M369I
DO8264
COAD
ICGC
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.6507
p.M369I
DO41488
UCEC
ICGC
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.6507
p.K358Q
TCGA-C5-A8YQ
CESC
TCGA
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.1667
p.K358Q
DO49906
CESC
ICGC
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.1667
p.L367V
DO233288
GACA
ICGC
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.3056
p.E361K
SIDM01032
Esophageal Squamous Cell Carcinoma
GDSC
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.1389
p.E361K
ACH-000823
Esophageal Cancer
CCLE
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.1389
p.E361K
KYSE-140
oesophagus
COSMIC
RMKIFED
LIG_APCC_ABBAyCdc20_2
0.1389
Drug responses associated with IFIT1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RMKIFED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T764
Interferon-induced protein with tetratricopeptide repeats 1B
LIG_APCC_ABBAyCdc20_2
368:374
RMKIFED
APC,CDC20,FZR1
0.6539
More...