DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RNLLFQD
Uniprot ID:
Q8WWK9
Source protein:
Cytoskeleton-associated protein 2
Source gene:
CKAP2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
555:561
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5207
ASA_SCORE:
108.4429
COIL:
0.3961
CONS_SCORE:
0.3351
DSS_SCORE:
0.4916
HELIX:
0.4597
FCONS_SCORE:
1.0569
RIG_SCORE:
0.7873
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D561E
TCGA-AP-A1DK
UCEC
TCGA
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.5647
p.L553R
TCGA-C8-A133
BRCA
TCGA
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.2778
p.K546Q
TCGA-CA-6718
COAD
TCGA
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.1944
p.L552R
DO1926
BRCA
ICGC
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.6944
p.K545Q
DO7801
COAD
ICGC
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.0556
p.C561F
DO229031
LICA
ICGC
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.7108
p.H553Y
DO222868
MELA
ICGC
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.2778
p.D560E
DO42033
UCEC
ICGC
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.6758
p.L547R
SIDM00079
Ovarian Carcinoma
GDSC
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.1111
p.L547R
ACH-000811
Ovarian Cancer
CCLE
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.1111
p.L547R
SK-OV-3
ovary
COSMIC
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.1111
p.H554Y
SIDM01397
Melanoma
GDSC
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.3056
p.H554Y
ACH-000765
Skin Cancer
CCLE
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.3056
p.L557S
ACH-002396
Bone Cancer
CCLE
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.6556
p.L557S
Sarc9371
bone
COSMIC
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.6556
p.S546P
GP5d
large_intestine
COSMIC
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.1944
p.L546R
SK-OV-3
ovary
COSMIC
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.1944
p.L556S
Sarc9371
bone
COSMIC
RNLLFQD
LIG_APCC_ABBAyCdc20_2
0.7667
Drug responses associated with CKAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RNLLFQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WWK9
Cytoskeleton-associated protein 2
LIG_APCC_ABBAyCdc20_2
555:561
RNLLFQD
APC,CDC20,FZR1
0.5207
More...