DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RNPMFLE
Uniprot ID:
Q7Z2K8
Source protein:
G protein-regulated inducer of neurite outgrowth 1
Source gene:
GPRIN1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
145:151
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8493
ASA_SCORE:
99.7714
COIL:
0.8021
CONS_SCORE:
0.3834
DSS_SCORE:
0.6718
HELIX:
0.1664
FCONS_SCORE:
1.035
RIG_SCORE:
0.7252
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P147S
TCGA-ER-A19K
SKCM
TCGA
RNPMFLE
LIG_APCC_ABBAyCdc20_2
0.5641
p.P147S
DO47672
SKCM
ICGC
RNPMFLE
LIG_APCC_ABBAyCdc20_2
0.5641
p.V135M
DO222765
COCA
ICGC
RNPMFLE
LIG_APCC_ABBAyCdc20_2
0.0556
p.V135M
DO233944
GACA
ICGC
RNPMFLE
LIG_APCC_ABBAyCdc20_2
0.0556
p.P139T
DO229038
LICA
ICGC
RNPMFLE
LIG_APCC_ABBAyCdc20_2
0.1667
p.T137I
DO220877
MELA
ICGC
RNPMFLE
LIG_APCC_ABBAyCdc20_2
0.1111
p.P147T
DO231467
THCA
ICGC
RNPMFLE
LIG_APCC_ABBAyCdc20_2
0.5919
p.M148T
SIDM00971
Breast Carcinoma
GDSC
RNPMFLE
LIG_APCC_ABBAyCdc20_2
0.7423
p.M148T
ACH-000828
Breast Cancer
CCLE
RNPMFLE
LIG_APCC_ABBAyCdc20_2
0.7423
p.M148T
ZR-75-30
breast
COSMIC
RNPMFLE
LIG_APCC_ABBAyCdc20_2
0.7423
Drug responses associated with GPRIN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RNPMFLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z2K8
G protein-regulated inducer of neurite outgrowth 1
LIG_APCC_ABBAyCdc20_2
145:151
RNPMFLE
APC,CDC20,FZR1
0.8493
More...