DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RNPVFQD
Uniprot ID:
Q969W3
Source protein:
Protein FAM104A
Source gene:
FAM104A
Class:
LIG_APCC_ABBAyCdc20_2
Location:
96:102
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.549
ASA_SCORE:
72.1714
COIL:
0.7844
CONS_SCORE:
0.7216
DSS_SCORE:
0.7278
HELIX:
0.1414
FCONS_SCORE:
0.9468
RIG_SCORE:
0.6416
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L87I
TCGA-75-5126
LUAD
TCGA
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.0833
p.L87I
DO23711
LUAD
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.0833
p.T91I
TCGA-AJ-A3EK
UCEC
TCGA
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.1944
p.T91I
DO41584
UCEC
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.1944
p.P88L
TCGA-D7-8579
STAD
TCGA
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.1111
p.P88L
DO47985
STAD
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.1111
p.P88L
SIDM00118
Colorectal Carcinoma
GDSC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.1111
p.P88L
HCC2998
large_intestine
COSMIC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.1111
p.P98S
TCGA-EE-A2GR
SKCM
TCGA
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.5641
p.P98S
DO37996
SKCM
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.5641
p.R100Q
DO10639
COAD
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.7329
p.R93I
DO230313
COCA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.25
p.R106Q
DO227646
COCA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.2222
p.I98T
DO229010
COCA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.7078
p.I98T
DO229013
COCA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.7078
p.I98T
DO229016
COCA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.7078
p.I98T
DO229003
COCA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.7078
p.I98T
DO229005
COCA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.7078
p.I98T
DO229480
LAML
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.7078
p.I98T
DO228957
LICA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.7078
p.I98T
DO231091
LUSC
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.7078
p.I98T
DO231155
LUSC
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.7078
p.H86N
DO229028
LICA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.0556
p.S87R
DO229027
LICA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.0833
p.H90N
DO229045
LICA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.1667
p.S97A
DO229051
LICA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.7588
p.P89S
DO35350
PACA
ICGC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.1389
p.T91A
SIDM00217
Colorectal Carcinoma
GDSC
RNPVFQD
LIG_APCC_ABBAyCdc20_2
0.1944
Drug responses associated with FAM104A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RNPVFQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q969W3
Protein FAM104A
LIG_APCC_ABBAyCdc20_2
96:102
RNPVFQD
APC,CDC20,FZR1
0.549
More...