DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RNVIYTD
Uniprot ID:
P03951
Source protein:
Coagulation factor XI
Source gene:
F11
Class:
LIG_APCC_ABBAyCdc20_2
Location:
507:513
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9542
ASA_SCORE:
72.9
COIL:
0.7447
CONS_SCORE:
0.3993
DSS_SCORE:
0.105
HELIX:
0.0096
FCONS_SCORE:
0.6082
RIG_SCORE:
0.892
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.W519S
TCGA-55-7994
LUAD
TCGA
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.1667
p.S503C
TCGA-60-2698
LUSC
TCGA
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.2222
p.R522I
TCGA-AJ-A3EL
UCEC
TCGA
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.0833
p.R522I
TCGA-AX-A1CE
UCEC
TCGA
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.0833
p.R522K
TCGA-AN-A046
BRCA
TCGA
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.0833
p.V509A
TCGA-B5-A3FA
UCEC
TCGA
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.5825
p.D513N
TCGA-QQ-A5VD
SARC
TCGA
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.6932
p.M506K
DO50288
SKCM
ICGC
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.3056
p.D506N
SIDM00007
Other Solid Cancers
GDSC
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.3056
p.D506N
ACH-001550
Skin Cancer
CCLE
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.3056
p.D506N
MCC13
skin
COSMIC
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R507K
SIDM01588
Endometrial Carcinoma
GDSC
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.6126
p.R507K
ACH-000993
Endometrial/Uterine Cancer
CCLE
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.6126
p.S521L
HCC2998
large_intestine
COSMIC
RNVIYTD
LIG_APCC_ABBAyCdc20_2
0.5556
Drug responses associated with F11 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RNVIYTD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P03951
Coagulation factor XI
LIG_APCC_ABBAyCdc20_2
507:513
RNVIYTD
APC,CDC20,FZR1
0.9542
More...