DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RPALYRD
Uniprot ID:
Q15906
Source protein:
Vacuolar protein sorting-associated protein 72 homolog
Source gene:
VPS72
Class:
LIG_APCC_ABBAyCdc20_2
Location:
297:303
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9757
ASA_SCORE:
66.9286
COIL:
0.6769
CONS_SCORE:
0.8026
DSS_SCORE:
0.265
HELIX:
0.0147
FCONS_SCORE:
1.161
RIG_SCORE:
0.7992
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H307R
TCGA-99-8025
LUAD
TCGA
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.2222
p.H307R
DO24255
LUAD
ICGC
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.2222
p.P290S
TCGA-A5-A0G2
UCEC
TCGA
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.1389
p.P290S
DO41235
UCEC
ICGC
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.1389
p.R293W
TCGA-AA-3864
COAD
TCGA
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.2222
p.R293W
DO8490
COAD
ICGC
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.2222
p.R300C
TCGA-PE-A5DE
BRCA
TCGA
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.8301
p.R300C
DO219643
BRCA
ICGC
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.8301
p.R300C
DO222395
MELA
ICGC
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.8301
p.R300C
DO232224
PBCA
ICGC
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.8301
p.A310D
DO229028
LICA
ICGC
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.1389
p.P298L
DO231683
LINC
ICGC
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.6471
p.L311V
SIDM00298
Squamous Cell Lung Carcinoma
GDSC
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.1111
p.L311V
ACH-000705
Lung Cancer
CCLE
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.1111
p.L311V
ACH-001113
Lung Cancer
CCLE
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.1111
p.L311V
ACH-002156
Lung Cancer
CCLE
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.1111
p.L311V
LC-1-sq
lung
COSMIC
RPALYRD
LIG_APCC_ABBAyCdc20_2
0.1111
Drug responses associated with VPS72 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RPALYRD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15906
Vacuolar protein sorting-associated protein 72 homolog
LIG_APCC_ABBAyCdc20_2
297:303
RPALYRD
APC,CDC20,FZR1
0.9757
More...