DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RPCLFWD
Uniprot ID:
Q8NCW0
Source protein:
Kremen protein 2
Source gene:
KREMEN2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
58:64
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5837
ASA_SCORE:
47.7714
COIL:
0.6181
CONS_SCORE:
0.4955
DSS_SCORE:
0.504
HELIX:
0.1113
FCONS_SCORE:
1.155
RIG_SCORE:
0.7953
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R50C
TCGA-UF-A7JS
HNSC
TCGA
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.1111
p.R50C
DO52119
HNSC
ICGC
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.1111
p.Q65H
DO233262
GACA
ICGC
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.3056
p.T66S
DO233262
GACA
ICGC
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.2778
p.G55E
SIDM00617
Hepatocellular Carcinoma
GDSC
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.25
p.G55E
JHH-2
liver
COSMIC
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.25
p.S72N
SIDM00510
Small Cell Lung Carcinoma
GDSC
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.1111
p.S72N
Sarc9371
bone
COSMIC
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.1111
p.A56S
SIDM00182
Head and Neck Carcinoma
GDSC
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.2778
p.A56S
ACH-002265
Head and Neck Cancer
CCLE
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.2778
p.A56S
LB771-HNC
upper_aerodigestive_tract
COSMIC
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.2778
p.F62L
SIDM01691
Chronic Myelogenous Leukemia
GDSC
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.6981
p.F62L
ACH-000321
Leukemia
CCLE
RPCLFWD
LIG_APCC_ABBAyCdc20_2
0.6981
Drug responses associated with KREMEN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RPCLFWD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NCW0
Kremen protein 2
LIG_APCC_ABBAyCdc20_2
58:64
RPCLFWD
APC,CDC20,FZR1
0.5837
More...