DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RPCLHPD
Uniprot ID:
Q9Y6C5
Source protein:
Protein patched homolog 2
Source gene:
PTCH2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
250:256
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6296
ASA_SCORE:
35.7
COIL:
0.8196
CONS_SCORE:
0.4817
DSS_SCORE:
0.3345
HELIX:
0.0549
FCONS_SCORE:
1.149
RIG_SCORE:
0.7011
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q242H
TCGA-AA-3811
COAD
TCGA
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.1111
p.Q242H
DO7962
COAD
ICGC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.1111
p.V243A
TCGA-D1-A1O7
UCEC
TCGA
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.1389
p.V243A
DO41139
UCEC
ICGC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.1389
p.P255T
TCGA-DK-A2I1
BLCA
TCGA
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.5919
p.P255T
TCGA-EE-A2M6
SKCM
TCGA
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.5919
p.P255T
DO444
BLCA
ICGC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.5919
p.P255T
DO37976
SKCM
ICGC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.5919
p.P261Q
TCGA-EB-A5UM
SKCM
TCGA
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.1944
p.P261Q
DO47282
SKCM
ICGC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.1944
p.R250W
DO483
BLCA
ICGC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.8634
p.P265A
DO52432
COCA
ICGC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.0833
p.P255H
DO229037
LICA
ICGC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.6583
p.L258I
DO229009
LICA
ICGC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.2778
p.A241V
SIDM02021
Esophageal Carcinoma
GDSC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.0833
p.H259Y
SIDM01004
Chronic Myelogenous Leukemia
GDSC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.25
p.H259Y
ACH-000983
Leukemia
CCLE
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.25
p.H259Y
KCL-22
haematopoietic_and_lymphoid_tissue
COSMIC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.25
p.A264T
SIDM00781
Colorectal Carcinoma
GDSC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.1111
p.A264T
SIDM00780
Colorectal Carcinoma
GDSC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.1111
p.A264T
ACH-000967
Colon/Colorectal Cancer
CCLE
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.1111
p.A264T
ACH-001199
Colon/Colorectal Cancer
CCLE
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.1111
p.A264T
SNU-C2B
large_intestine
COSMIC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.1111
p.Q245H
SIDM00953
Small Cell Lung Carcinoma
GDSC
RPCLHPD
LIG_APCC_ABBAyCdc20_2
0.1944
Drug responses associated with PTCH2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RPCLHPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y6C5
Protein patched homolog 2
LIG_APCC_ABBAyCdc20_2
250:256
RPCLHPD
APC,CDC20,FZR1
0.6296
More...