DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RPELFDE
Uniprot ID:
P46013
Source protein:
Proliferation marker protein Ki-67
Source gene:
MKI67
Class:
LIG_APCC_ABBAyCdc20_2
Location:
513:519
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9982
ASA_SCORE:
101.2
COIL:
0.7163
CONS_SCORE:
0.9118
DSS_SCORE:
0.5178
HELIX:
0.2771
FCONS_SCORE:
1.0172
RIG_SCORE:
0.726
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S507F
TCGA-22-5473
LUSC
TCGA
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.6111
p.S507F
TCGA-YD-A89C
SKCM
TCGA
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.6111
p.P526S
TCGA-A5-A0VP
UCEC
TCGA
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.1389
p.R505H
TCGA-AP-A051
UCEC
TCGA
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R505H
SIDM00837
Colorectal Carcinoma
GDSC
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R505H
SW48
large_intestine
COSMIC
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R503I
TCGA-AP-A1DV
UCEC
TCGA
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R503I
TCGA-EO-A3B0
UCEC
TCGA
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.0556
p.P523A
TCGA-B0-4706
KIRC
TCGA
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.2222
p.R529S
TCGA-D3-A2JP
SKCM
TCGA
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R513I
TCGA-EY-A1GI
UCEC
TCGA
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.8102
p.D518H
TCGA-GM-A2D9
BRCA
TCGA
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.6577
p.D518N
TCGA-XF-A9T8
BLCA
TCGA
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.5821
p.S506L
DO51632
CESC
ICGC
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.1389
p.S510P
DO9876
COAD
ICGC
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.25
p.T503A
DO222884
COCA
ICGC
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.0556
p.V529M
DO26423
LUSC
ICGC
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.0556
p.Q525H
DO219161
LUSC
ICGC
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.6111
p.T525M
SIDM00846
Cervical Carcinoma
GDSC
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.6111
p.T525M
HeLa
cervix
COSMIC
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.6111
p.G510V
ACH-000887
Brain Cancer
CCLE
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.25
p.E520D
KYSE-270
oesophagus
COSMIC
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.3056
p.P528H
639-V
urinary_tract
COSMIC
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.5278
p.E504D
NCI-H1155
lung
COSMIC
RPELFDE
LIG_APCC_ABBAyCdc20_2
0.0833
Drug responses associated with MKI67 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RPELFDE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P46013
Proliferation marker protein Ki-67
LIG_APCC_ABBAyCdc20_2
513:519
RPELFDE
APC,CDC20,FZR1
0.9982
More...