DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RPGMYPD
Uniprot ID:
P41162
Source protein:
ETS translocation variant 3
Source gene:
ETV3
Class:
LIG_APCC_ABBAyCdc20_2
Location:
236:242
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9987
ASA_SCORE:
74.9429
COIL:
0.9464
CONS_SCORE:
0.4472
DSS_SCORE:
0.3646
HELIX:
0.017
FCONS_SCORE:
0.8093
RIG_SCORE:
0.6593
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P232H
TCGA-AP-A059
UCEC
TCGA
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.2222
p.P232H
DO41361
UCEC
ICGC
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.2222
p.V249A
TCGA-AX-A0J0
UCEC
TCGA
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.1389
p.V249A
DO41133
UCEC
ICGC
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.1389
p.L231R
TCGA-AX-A0J0
UCEC
TCGA
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.1944
p.L231R
DO41133
UCEC
ICGC
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.1944
p.L233R
TCGA-EY-A215
UCEC
TCGA
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.25
p.L233R
DO42665
UCEC
ICGC
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.25
p.P251A
TCGA-KP-A3W4
UCEC
TCGA
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.0833
p.P251A
DO219781
UCEC
ICGC
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.0833
p.A248T
DO222794
COCA
ICGC
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.1667
p.A248T
SIDM00537
Colorectal Carcinoma
GDSC
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.1667
p.A248T
GP5d
large_intestine
COSMIC
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.1667
p.P232R
DO10839
ESAD
ICGC
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.2222
p.L231I
DO229019
LICA
ICGC
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.1944
p.D242E
DO229008
LICA
ICGC
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.5647
p.A235T
ACH-000165
Non-Cancerous
CCLE
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.3056
p.A235S
ACH-001737
Leukemia
CCLE
RPGMYPD
LIG_APCC_ABBAyCdc20_2
0.3056
Drug responses associated with ETV3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RPGMYPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P41162
ETS translocation variant 3
LIG_APCC_ABBAyCdc20_2
236:242
RPGMYPD
APC,CDC20,FZR1
0.9987
More...