DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
RPPATVHPE
Uniprot ID:
Q9BUL5
Source protein:
PHD finger protein 23
Source gene:
PHF23
Class:
DEG_SIAH_1
Location:
283:291
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.708
ASA_SCORE:
103.8111
COIL:
0.9428
CONS_SCORE:
0.52
DSS_SCORE:
0.8038
HELIX:
0.0237
FCONS_SCORE:
0.9759
RIG_SCORE:
0.5832
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E291K
TCGA-55-6969
LUAD
TCGA
RPPATVHPE
DEG_SIAH_1
0.591
p.E280D
TCGA-AX-A2HC
UCEC
TCGA
RPPATVHPE
DEG_SIAH_1
0.25
p.L291M
DO9698
COAD
ICGC
RPPATVHPE
DEG_SIAH_1
0.711
p.H297R
DO233207
GACA
ICGC
RPPATVHPE
DEG_SIAH_1
0.1667
p.C277Y
DO233944
GACA
ICGC
RPPATVHPE
DEG_SIAH_1
0.1667
p.G283W
DO50458
KIRC
ICGC
RPPATVHPE
DEG_SIAH_1
0.7825
p.R278L
DO50971
LICA
ICGC
RPPATVHPE
DEG_SIAH_1
0.1944
p.I287V
DO219771
UCEC
ICGC
RPPATVHPE
DEG_SIAH_1
0.7076
p.R283S
SIDM00945
Colorectal Carcinoma
GDSC
RPPATVHPE
DEG_SIAH_1
0.6316
p.R283S
CL-34
large_intestine
COSMIC
RPPATVHPE
DEG_SIAH_1
0.6316
p.P285S
SIDM00150
Colorectal Carcinoma
GDSC
RPPATVHPE
DEG_SIAH_1
0.5641
p.P285S
KM12
large_intestine
COSMIC
RPPATVHPE
DEG_SIAH_1
0.5641
p.P281S
KM12
large_intestine
COSMIC
RPPATVHPE
DEG_SIAH_1
0.2778
p.A301V
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
RPPATVHPE
DEG_SIAH_1
0.1667
p.C300S
LNCaP-Clone-FGC
prostate
COSMIC
RPPATVHPE
DEG_SIAH_1
0.0833
p.R279S
CL-34
large_intestine
COSMIC
RPPATVHPE
DEG_SIAH_1
0.2222
Drug responses associated with PHF23 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RPPATVHPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BUL5
PHD finger protein 23
DEG_SIAH_1
283:291
RPPATVHPE
SIAH1,SIAH2,SIAH3
0.708
More...