DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RPPLFLD
Uniprot ID:
P35212
Source protein:
Gap junction alpha-4 protein
Source gene:
GJA4
Class:
LIG_APCC_ABBAyCdc20_2
Location:
304:310
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9753
ASA_SCORE:
101.1
COIL:
0.9487
CONS_SCORE:
0.2585
DSS_SCORE:
0.7861
HELIX:
0.035
FCONS_SCORE:
0.7222
RIG_SCORE:
0.6471
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R304S
TCGA-13-0894
OV
TCGA
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.7427
p.R304S
DO28591
OV
ICGC
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.7427
p.P305S
TCGA-13-0894
OV
TCGA
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.5641
p.P305S
DO28591
OV
ICGC
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.5641
p.R299T
TCGA-2Z-A9J2
KIRP
TCGA
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.1944
p.R299T
DO219650
KIRP
ICGC
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.1944
p.P311S
TCGA-BR-4361
STAD
TCGA
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.P311S
DO38887
STAD
ICGC
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.P313T
TCGA-CV-6943
HNSC
TCGA
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.25
p.P313T
DO15511
HNSC
ICGC
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.25
p.S303F
TCGA-IB-7651
PAAD
TCGA
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.S303F
DO46657
PAAD
ICGC
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.3056
p.P319S
DO229016
COCA
ICGC
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.5278
p.P319S
DO229005
COCA
ICGC
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.5278
p.T296I
SIDM00120
Prostate Carcinoma
GDSC
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.1111
p.T296I
ACH-000979
Prostate Cancer
CCLE
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.1111
p.T296I
DU-145
prostate
COSMIC
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.1111
p.P320S
SIDM00814
Other Solid Cancers
GDSC
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.0556
p.P320S
ACH-001401
Adrenal Cancer
CCLE
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.0556
p.P320S
SW13
adrenal_gland
COSMIC
RPPLFLD
LIG_APCC_ABBAyCdc20_2
0.0556
Drug responses associated with GJA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RPPLFLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35212
Gap junction alpha-4 protein
LIG_APCC_ABBAyCdc20_2
304:310
RPPLFLD
APC,CDC20,FZR1
0.9753
More...