DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RPSMFPE
Uniprot ID:
Q9UPX8
Source protein:
SH3 and multiple ankyrin repeat domains protein 2
Source gene:
SHANK2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
743:749
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9592
ASA_SCORE:
96.1143
COIL:
0.939
CONS_SCORE:
0.3702
DSS_SCORE:
0.801
HELIX:
0.03
FCONS_SCORE:
1.0933
RIG_SCORE:
0.6275
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R740W
TCGA-AA-A022
COAD
TCGA
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.25
p.R740W
DO10647
COAD
ICGC
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.25
p.R749C
TCGA-B5-A11E
UCEC
TCGA
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R749C
DO41644
UCEC
ICGC
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.8301
p.T747A
TCGA-E6-A2P9
UCEC
TCGA
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.7139
p.T747A
DO43714
UCEC
ICGC
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.7139
p.S752F
DO231127
LUSC
ICGC
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.25
p.S752F
DO37531
SKCM
ICGC
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.25
p.K733I
DO222599
MELA
ICGC
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R749H
DO232224
PBCA
ICGC
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.8244
p.P738L
DO37409
SKCM
ICGC
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.E756D
DO229272
THCA
ICGC
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.1389
p.E742K
SIDM00140
Melanoma
GDSC
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.3056
p.E742K
COLO-792
skin
COSMIC
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.3056
p.E734K
ACH-000968
Skin Cancer
CCLE
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.E734K
COLO-792
skin
COSMIC
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.0833
p.D746H
ACH-001411
Bladder Cancer
CCLE
RPSMFPE
LIG_APCC_ABBAyCdc20_2
0.7688
Drug responses associated with SHANK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RPSMFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPX8
SH3 and multiple ankyrin repeat domains protein 2
LIG_APCC_ABBAyCdc20_2
743:749
RPSMFPE
APC,CDC20,FZR1
0.9592
More...