DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RPTATVSPL
Uniprot ID:
Q8TEJ3
Source protein:
E3 ubiquitin-protein ligase SH3RF3
Source gene:
SH3RF3
Class:
DEG_SIAH_1
Location:
620:628
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9843
ASA_SCORE:
66.7444
COIL:
0.8519
CONS_SCORE:
0.4123
DSS_SCORE:
0.7318
HELIX:
0.0697
FCONS_SCORE:
1.0884
RIG_SCORE:
0.6623
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S613F
TCGA-AA-3967
COAD
TCGA
RPTATVSPL
DEG_SIAH_1
0.1389
p.S613F
DO10124
COAD
ICGC
RPTATVSPL
DEG_SIAH_1
0.1389
p.R620Q
TCGA-AG-A02N
READ
TCGA
RPTATVSPL
DEG_SIAH_1
0.6218
p.R620Q
DO37146
READ
ICGC
RPTATVSPL
DEG_SIAH_1
0.6218
p.N632Y
TCGA-AX-A06F
UCEC
TCGA
RPTATVSPL
DEG_SIAH_1
0.2222
p.N632Y
DO41752
UCEC
ICGC
RPTATVSPL
DEG_SIAH_1
0.2222
p.R629C
TCGA-F4-6570
COAD
TCGA
RPTATVSPL
DEG_SIAH_1
0.3056
p.R629C
DO10443
COAD
ICGC
RPTATVSPL
DEG_SIAH_1
0.3056
p.R629H
TCGA-IB-7651
PAAD
TCGA
RPTATVSPL
DEG_SIAH_1
0.3056
p.R629H
DO222764
ESCA
ICGC
RPTATVSPL
DEG_SIAH_1
0.3056
p.R629H
DO46657
PAAD
ICGC
RPTATVSPL
DEG_SIAH_1
0.3056
p.R636C
DO229123
NKTL
ICGC
RPTATVSPL
DEG_SIAH_1
0.1111
p.Q618E
SIDM00108
Melanoma
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.Q618E
SIDM00632
Non-Cancerous
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.Q618E
SIDM00731
Small Cell Lung Carcinoma
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.Q618E
SIDM01165
Pancreatic Carcinoma
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.Q618E
SIDM00748
Non-Small Cell Lung Carcinoma
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.Q618E
SIDM00965
Small Cell Lung Carcinoma
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.Q618E
SIDM00963
Breast Carcinoma
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.Q618E
SIDM00964
Non-Cancerous
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.Q618E
SIDM00105
Ovarian Carcinoma
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.Q618E
SIDM00937
Oral Cavity Carcinoma
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.Q618E
SIDM01624
Bladder Carcinoma
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.Q618E
SIDM01529
Bladder Carcinoma
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.Q618E
SIDM00093
Ovarian Carcinoma
GDSC
RPTATVSPL
DEG_SIAH_1
0.2778
p.R636H
SIDM00986
Head and Neck Carcinoma
GDSC
RPTATVSPL
DEG_SIAH_1
0.1111
p.R636H
ACH-000548
Head and Neck Cancer
CCLE
RPTATVSPL
DEG_SIAH_1
0.1111
p.R636H
BHY
upper_aerodigestive_tract
COSMIC
RPTATVSPL
DEG_SIAH_1
0.1111
p.S635P
ACH-000966
Ovarian Cancer
CCLE
RPTATVSPL
DEG_SIAH_1
0.1389
p.S635P
ACH-001591
Lung Cancer
CCLE
RPTATVSPL
DEG_SIAH_1
0.1389
p.S635F
ACH-001982
Metastasis
CCLE
RPTATVSPL
DEG_SIAH_1
0.1389
Drug responses associated with SH3RF3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RPTATVSPL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TEJ3
E3 ubiquitin-protein ligase SH3RF3
DEG_SIAH_1
620:628
RPTATVSPL
SIAH1,SIAH2,SIAH3
0.9843
More...