DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RQVLFDD
Uniprot ID:
Q9H7Z3
Source protein:
Nuclear exosome regulator NRDE2
Source gene:
NRDE2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
613:619
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6774
ASA_SCORE:
49.2429
COIL:
0.3087
CONS_SCORE:
0.6088
DSS_SCORE:
0.3337
HELIX:
0.4997
FCONS_SCORE:
1.4103
RIG_SCORE:
0.8396
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q622R
TCGA-AA-3664
COAD
TCGA
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.25
p.Q622R
DO7831
COAD
ICGC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.25
p.E609D
TCGA-AX-A1CE
UCEC
TCGA
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.2222
p.E609D
DO42280
UCEC
ICGC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.2222
p.Q614H
TCGA-DF-A2KU
UCEC
TCGA
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.647
p.Q614H
DO223286
UCEC
ICGC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.647
p.D618V
TCGA-ZP-A9CY
LIHC
TCGA
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.6674
p.D618V
DO52329
LIHC
ICGC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.6674
p.I625V
DO228208
LICA
ICGC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.1667
p.P611L
DO222843
MELA
ICGC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.2778
p.E605K
DO232761
PBCA
ICGC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.1111
p.D607H
SIDM00328
Esophageal Squamous Cell Carcinoma
GDSC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.1667
p.D607H
ACH-000605
Esophageal Cancer
CCLE
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.1667
p.D607H
TE-6
oesophagus
COSMIC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.1667
p.E612K
SIDM00841
Colorectal Carcinoma
GDSC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.3056
p.E612K
ACH-000651
Colon/Colorectal Cancer
CCLE
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.3056
p.E612K
ACH-000842
Colon/Colorectal Cancer
CCLE
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.3056
p.E612K
SW620
large_intestine
COSMIC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.3056
p.C608F
SIDM00382
Glioblastoma
GDSC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.1944
p.C608F
ACH-000609
Brain Cancer
CCLE
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.1944
p.C608F
SF126
central_nervous_system
COSMIC
RQVLFDD
LIG_APCC_ABBAyCdc20_2
0.1944
Drug responses associated with NRDE2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RQVLFDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H7Z3
Nuclear exosome regulator NRDE2
LIG_APCC_ABBAyCdc20_2
613:619
RQVLFDD
APC,CDC20,FZR1
0.6774
More...