DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RRASLSDIG
Uniprot ID:
Q07002
Source protein:
Cyclin-dependent kinase 18
Source gene:
CDK18
Class:
DEG_APCC_DBOX_1
Location:
129:137
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8795
ASA_SCORE:
77.0667
COIL:
0.7771
CONS_SCORE:
0.6478
DSS_SCORE:
0.3005
HELIX:
0.1793
FCONS_SCORE:
0.9534
RIG_SCORE:
0.7194
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D132N
TCGA-56-A5DS
LUSC
TCGA
RRASLSDIG
DEG_APCC_DBOX_1
0.6932
p.S124G
TCGA-5C-A9VH
LIHC
TCGA
RRASLSDIG
DEG_APCC_DBOX_1
0.1944
p.E146D
TCGA-A5-A0G2
UCEC
TCGA
RRASLSDIG
DEG_APCC_DBOX_1
0.5278
p.R134H
TCGA-D1-A2G0
UCEC
TCGA
RRASLSDIG
DEG_APCC_DBOX_1
0.8244
p.S147N
TCGA-DA-A1I7
SKCM
TCGA
RRASLSDIG
DEG_APCC_DBOX_1
0.0556
p.R134S
TCGA-DA-A1IB
SKCM
TCGA
RRASLSDIG
DEG_APCC_DBOX_1
0.7427
p.E138D
TCGA-EO-A3B0
UCEC
TCGA
RRASLSDIG
DEG_APCC_DBOX_1
0.3056
p.G139V
DO233906
GACA
ICGC
RRASLSDIG
DEG_APCC_DBOX_1
0.2778
p.G139V
DO47509
SKCM
ICGC
RRASLSDIG
DEG_APCC_DBOX_1
0.2778
p.A131S
DO229045
LICA
ICGC
RRASLSDIG
DEG_APCC_DBOX_1
0.6477
p.E142D
DO232761
PBCA
ICGC
RRASLSDIG
DEG_APCC_DBOX_1
0.1944
p.P136L
SIDM01078
Small Cell Lung Carcinoma
GDSC
RRASLSDIG
DEG_APCC_DBOX_1
0.7582
p.P136L
SHP-77
lung
COSMIC
RRASLSDIG
DEG_APCC_DBOX_1
0.7582
p.V123I
SIDM01145
Gastric Carcinoma
GDSC
RRASLSDIG
DEG_APCC_DBOX_1
0.1667
p.V123I
SIDM00364
B-Lymphoblastic Leukemia
GDSC
RRASLSDIG
DEG_APCC_DBOX_1
0.1667
p.V123I
SIDM01019
Acute Myeloid Leukemia
GDSC
RRASLSDIG
DEG_APCC_DBOX_1
0.1667
p.V123I
SIDM00306
Non-Small Cell Lung Carcinoma
GDSC
RRASLSDIG
DEG_APCC_DBOX_1
0.1667
p.V123I
NCI-SNU-16
stomach
COSMIC
RRASLSDIG
DEG_APCC_DBOX_1
0.1667
p.V123I
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
RRASLSDIG
DEG_APCC_DBOX_1
0.1667
p.V123I
KMOE-2
haematopoietic_and_lymphoid_tissue
COSMIC
RRASLSDIG
DEG_APCC_DBOX_1
0.1667
p.V123I
IA-LM
lung
COSMIC
RRASLSDIG
DEG_APCC_DBOX_1
0.1667
p.I136T
ACH-000177
Prostate Cancer
CCLE
RRASLSDIG
DEG_APCC_DBOX_1
0.7078
p.I136T
NCI-H660
prostate
COSMIC
RRASLSDIG
DEG_APCC_DBOX_1
0.7078
p.R126H
ACH-000559
Lung Cancer
CCLE
RRASLSDIG
DEG_APCC_DBOX_1
0.25
p.R126H
NCI-H1836
lung
COSMIC
RRASLSDIG
DEG_APCC_DBOX_1
0.25
Drug responses associated with CDK18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRASLSDIG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q07002
Cyclin-dependent kinase 18
DEG_APCC_DBOX_1
129:137
RRASLSDIG
APC,CDC20,FZR1
0.8795
More...