DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRDYLVTVP
Uniprot ID:
Q8TDW7
Source protein:
Protocadherin Fat 3
Source gene:
FAT3
Class:
DEG_APCC_DBOX_1
Location:
3238:3246
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7937
ASA_SCORE:
60.5778
COIL:
0.2233
CONS_SCORE:
0.5149
DSS_SCORE:
0.4606
HELIX:
0.0071
FCONS_SCORE:
0.7988
RIG_SCORE:
0.8576
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T3249I
TCGA-D1-A17A
UCEC
TCGA
RRDYLVTVP
DEG_APCC_DBOX_1
0.25
p.P3246S
TCGA-DD-A113
LIHC
TCGA
RRDYLVTVP
DEG_APCC_DBOX_1
0.5641
p.P3246S
DO22920
LIHC
ICGC
RRDYLVTVP
DEG_APCC_DBOX_1
0.5641
p.P3234L
TCGA-EE-A3JB
SKCM
TCGA
RRDYLVTVP
DEG_APCC_DBOX_1
0.2222
p.P3234L
DO51250
SKCM
ICGC
RRDYLVTVP
DEG_APCC_DBOX_1
0.2222
p.R3256L
DO1078
BRCA
ICGC
RRDYLVTVP
DEG_APCC_DBOX_1
0.0556
p.R3256L
DO26530
LUSC
ICGC
RRDYLVTVP
DEG_APCC_DBOX_1
0.0556
p.R3256L
DO26602
LUSC
ICGC
RRDYLVTVP
DEG_APCC_DBOX_1
0.0556
p.R3235W
DO222798
COCA
ICGC
RRDYLVTVP
DEG_APCC_DBOX_1
0.25
p.R3235W
DO220906
MELA
ICGC
RRDYLVTVP
DEG_APCC_DBOX_1
0.25
p.R3235W
ACH-001841
Bile Duct Cancer
CCLE
RRDYLVTVP
DEG_APCC_DBOX_1
0.25
p.K3252N
DO234213
ESAD
ICGC
RRDYLVTVP
DEG_APCC_DBOX_1
0.1667
p.P3251S
DO218769
GACA
ICGC
RRDYLVTVP
DEG_APCC_DBOX_1
0.1944
p.P3243L
DO220873
MELA
ICGC
RRDYLVTVP
DEG_APCC_DBOX_1
0.7582
p.PP3233PS
DO222363
MELA
ICGC
RRDYLVTVP
DEG_APCC_DBOX_1
0
p.P3251R
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
RRDYLVTVP
DEG_APCC_DBOX_1
0.1944
p.P3251R
NCI-H650
lung
COSMIC
RRDYLVTVP
DEG_APCC_DBOX_1
0.1944
p.R3238K
SIDM01031
Esophageal Squamous Cell Carcinoma
GDSC
RRDYLVTVP
DEG_APCC_DBOX_1
0.6126
p.R3238K
KYSE-150
oesophagus
COSMIC
RRDYLVTVP
DEG_APCC_DBOX_1
0.6126
p.R3235L
ACH-000334
Lymphoma
CCLE
RRDYLVTVP
DEG_APCC_DBOX_1
0.25
p.R3235L
DB
haematopoietic_and_lymphoid_tissue
COSMIC
RRDYLVTVP
DEG_APCC_DBOX_1
0.25
Drug responses associated with FAT3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRDYLVTVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TDW7
Protocadherin Fat 3
DEG_APCC_DBOX_1
3238:3246
RRDYLVTVP
APC,CDC20,FZR1
0.7937
More...