DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRFVFFD
Uniprot ID:
Q9H270
Source protein:
Vacuolar protein sorting-associated protein 11 homolog
Source gene:
VPS11
Class:
LIG_APCC_ABBAyCdc20_2
Location:
8:14
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9134
ASA_SCORE:
71.7429
COIL:
0.5901
CONS_SCORE:
0.4846
DSS_SCORE:
0.0762
HELIX:
0.0213
FCONS_SCORE:
1.6695
RIG_SCORE:
0.9596
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P21S
DO233129
GACA
ICGC
RRFVFFD
LIG_APCC_ABBAyCdc20_2
0.1389
p.D14E
SIDM00845
Burkitt's Lymphoma
GDSC
RRFVFFD
LIG_APCC_ABBAyCdc20_2
0.5647
p.A12P
SIDM00845
Burkitt's Lymphoma
GDSC
RRFVFFD
LIG_APCC_ABBAyCdc20_2
0.7503
p.A12P
SIDM00721
Small Cell Lung Carcinoma
GDSC
RRFVFFD
LIG_APCC_ABBAyCdc20_2
0.7503
p.R6L
SIDM00526
Chronic Myelogenous Leukemia
GDSC
RRFVFFD
LIG_APCC_ABBAyCdc20_2
0.2778
p.R6L
MEG-01
haematopoietic_and_lymphoid_tissue
COSMIC
RRFVFFD
LIG_APCC_ABBAyCdc20_2
0.2778
p.L23F
HCT-15
large_intestine
COSMIC
RRFVFFD
LIG_APCC_ABBAyCdc20_2
0.0833
p.G5V
HCT-15
large_intestine
COSMIC
RRFVFFD
LIG_APCC_ABBAyCdc20_2
0.25
Drug responses associated with VPS11 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRFVFFD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H270
Vacuolar protein sorting-associated protein 11 homolog
LIG_APCC_ABBAyCdc20_2
8:14
RRFVFFD
APC,CDC20,FZR1
0.9134
More...