DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RRGDLPFVV
Uniprot ID:
P35579
Source protein:
Myosin-9
Source gene:
MYH9
Class:
DEG_APCC_DBOX_1
Location:
1922:1930
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9026
ASA_SCORE:
101.2778
COIL:
0.8039
CONS_SCORE:
0.2588
DSS_SCORE:
0.4677
HELIX:
0.1796
FCONS_SCORE:
0.9325
RIG_SCORE:
0.7604
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1916F
TCGA-21-5783
LUSC
TCGA
RRGDLPFVV
DEG_APCC_DBOX_1
0.6111
p.S1916F
TCGA-XV-A9VZ
SKCM
TCGA
RRGDLPFVV
DEG_APCC_DBOX_1
0.6111
p.S1916F
DO27437
LUSC
ICGC
RRGDLPFVV
DEG_APCC_DBOX_1
0.6111
p.S1916F
DO219489
SKCM
ICGC
RRGDLPFVV
DEG_APCC_DBOX_1
0.6111
p.R1912C
TCGA-A5-A0GB
UCEC
TCGA
RRGDLPFVV
DEG_APCC_DBOX_1
0.0556
p.R1912C
DO41434
UCEC
ICGC
RRGDLPFVV
DEG_APCC_DBOX_1
0.0556
p.R1912H
TCGA-AA-A010
COAD
TCGA
RRGDLPFVV
DEG_APCC_DBOX_1
0.0556
p.R1912H
TCGA-D1-A16R
UCEC
TCGA
RRGDLPFVV
DEG_APCC_DBOX_1
0.0556
p.R1912H
DO41831
UCEC
ICGC
RRGDLPFVV
DEG_APCC_DBOX_1
0.0556
p.R1936Q
TCGA-HU-A4G8
STAD
TCGA
RRGDLPFVV
DEG_APCC_DBOX_1
0.1667
p.R1936Q
DO233903
GACA
ICGC
RRGDLPFVV
DEG_APCC_DBOX_1
0.1667
p.R1936Q
DO47819
STAD
ICGC
RRGDLPFVV
DEG_APCC_DBOX_1
0.1667
p.R1932H
DO227657
COCA
ICGC
RRGDLPFVV
DEG_APCC_DBOX_1
0.2778
p.R1932C
DO233143
GACA
ICGC
RRGDLPFVV
DEG_APCC_DBOX_1
0.2778
p.A1939T
DO233882
GACA
ICGC
RRGDLPFVV
DEG_APCC_DBOX_1
0.0833
p.V1930M
DO35478
PACA
ICGC
RRGDLPFVV
DEG_APCC_DBOX_1
0.6097
p.G1940R
SIDM00284
Melanoma
GDSC
RRGDLPFVV
DEG_APCC_DBOX_1
0.0556
p.G1940R
SIDM00272
Breast Carcinoma
GDSC
RRGDLPFVV
DEG_APCC_DBOX_1
0.0556
p.G1940R
SIDM01128
Small Cell Lung Carcinoma
GDSC
RRGDLPFVV
DEG_APCC_DBOX_1
0.0556
p.G1940R
SIDM01739
Small Cell Lung Carcinoma
GDSC
RRGDLPFVV
DEG_APCC_DBOX_1
0.0556
Drug responses associated with MYH9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRGDLPFVV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35579
Myosin-9
DEG_APCC_DBOX_1
1922:1930
RRGDLPFVV
APC,CDC20,FZR1
0.9026
More...