DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRGVLMTLL
Uniprot ID:
Q96ES7
Source protein:
SAGA-associated factor 29
Source gene:
SGF29
Class:
DEG_APCC_DBOX_1
Location:
115:123
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6298
ASA_SCORE:
80.6556
COIL:
0.5027
CONS_SCORE:
0.4136
DSS_SCORE:
0.4328
HELIX:
0.4132
FCONS_SCORE:
1.1797
RIG_SCORE:
0.8287
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R115H
SIDM01058
B-Cell Non-Hodgkin's Lymphoma
GDSC
RRGVLMTLL
DEG_APCC_DBOX_1
0.7133
p.R115H
GRANTA-519
haematopoietic_and_lymphoid_tissue
COSMIC
RRGVLMTLL
DEG_APCC_DBOX_1
0.7133
p.K112N
SIDM00099
Mesothelioma
GDSC
RRGVLMTLL
DEG_APCC_DBOX_1
0.3611
p.K112N
H2722
pleura
COSMIC
RRGVLMTLL
DEG_APCC_DBOX_1
0.3611
Drug responses associated with SGF29 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRGVLMTLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96ES7
SAGA-associated factor 29
DEG_APCC_DBOX_1
115:123
RRGVLMTLL
APC,CDC20,FZR1
0.6298
More...