DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRHELSDIT
Uniprot ID:
Q9UPQ7
Source protein:
E3 ubiquitin-protein ligase PDZRN3
Source gene:
PDZRN3
Class:
DEG_APCC_DBOX_1
Location:
736:744
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9654
ASA_SCORE:
94.2889
COIL:
0.6233
CONS_SCORE:
0.5693
DSS_SCORE:
0.4506
HELIX:
0.2726
FCONS_SCORE:
1.0413
RIG_SCORE:
0.7663
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N730S
TCGA-17-Z049
LUAD
TCGA
RRHELSDIT
DEG_APCC_DBOX_1
0.1667
p.D734N
TCGA-77-7141
LUSC
TCGA
RRHELSDIT
DEG_APCC_DBOX_1
0.2778
p.D734N
DO26450
LUSC
ICGC
RRHELSDIT
DEG_APCC_DBOX_1
0.2778
p.R736C
TCGA-B5-A3FC
UCEC
TCGA
RRHELSDIT
DEG_APCC_DBOX_1
0.719
p.R736C
DO41871
UCEC
ICGC
RRHELSDIT
DEG_APCC_DBOX_1
0.719
p.D751G
TCGA-BA-4078
HNSC
TCGA
RRHELSDIT
DEG_APCC_DBOX_1
0.1389
p.P747L
TCGA-CN-4734
HNSC
TCGA
RRHELSDIT
DEG_APCC_DBOX_1
0.25
p.P747L
DO15446
HNSC
ICGC
RRHELSDIT
DEG_APCC_DBOX_1
0.25
p.T744A
TCGA-EC-A24G
UCEC
TCGA
RRHELSDIT
DEG_APCC_DBOX_1
0.6028
p.T744A
DO40996
UCEC
ICGC
RRHELSDIT
DEG_APCC_DBOX_1
0.6028
p.R737I
TCGA-F7-A624
HNSC
TCGA
RRHELSDIT
DEG_APCC_DBOX_1
0.8102
p.R737I
DO44440
HNSC
ICGC
RRHELSDIT
DEG_APCC_DBOX_1
0.8102
p.R727C
TCGA-QC-A7B5
SARC
TCGA
RRHELSDIT
DEG_APCC_DBOX_1
0.0833
p.R727C
DO220239
SARC
ICGC
RRHELSDIT
DEG_APCC_DBOX_1
0.0833
p.R727C
SIDM02079
Esophageal Carcinoma
GDSC
RRHELSDIT
DEG_APCC_DBOX_1
0.0833
p.D751N
TCGA-XF-A9T5
BLCA
TCGA
RRHELSDIT
DEG_APCC_DBOX_1
0.1389
p.D751N
DO51925
BLCA
ICGC
RRHELSDIT
DEG_APCC_DBOX_1
0.1389
p.S750F
DO220851
MELA
ICGC
RRHELSDIT
DEG_APCC_DBOX_1
0.6111
p.D753N
SIDM00789
Colorectal Carcinoma
GDSC
RRHELSDIT
DEG_APCC_DBOX_1
0.0833
p.D753N
HCT-15
large_intestine
COSMIC
RRHELSDIT
DEG_APCC_DBOX_1
0.0833
p.R736H
SIDM01574
Plasma Cell Myeloma
GDSC
RRHELSDIT
DEG_APCC_DBOX_1
0.7133
p.R729T
ACH-000022
Pancreatic Cancer
CCLE
RRHELSDIT
DEG_APCC_DBOX_1
0.1389
p.K748N
ACH-000566
Bladder Cancer
CCLE
RRHELSDIT
DEG_APCC_DBOX_1
0.2222
p.K748N
SW1710
urinary_tract
COSMIC
RRHELSDIT
DEG_APCC_DBOX_1
0.2222
p.N747D
ACH-000982
Colon/Colorectal Cancer
CCLE
RRHELSDIT
DEG_APCC_DBOX_1
0.25
p.N747D
ACH-001345
Colon/Colorectal Cancer
CCLE
RRHELSDIT
DEG_APCC_DBOX_1
0.25
p.N747D
GP5d
large_intestine
COSMIC
RRHELSDIT
DEG_APCC_DBOX_1
0.25
p.K741N
ACH-001358
Breast Cancer
CCLE
RRHELSDIT
DEG_APCC_DBOX_1
0.6918
p.K741N
MDA-MB-330
breast
COSMIC
RRHELSDIT
DEG_APCC_DBOX_1
0.6918
Drug responses associated with PDZRN3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRHELSDIT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPQ7
E3 ubiquitin-protein ligase PDZRN3
DEG_APCC_DBOX_1
736:744
RRHELSDIT
APC,CDC20,FZR1
0.9654
More...