DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRKKLERMY
Uniprot ID:
Q6X4W1
Source protein:
NMDA receptor synaptonuclear signaling and neuronal migration factor
Source gene:
NSMF
Class:
DEG_APCC_DBOX_1
Location:
195:203
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8814
ASA_SCORE:
105.8556
COIL:
0.4394
CONS_SCORE:
0.5287
DSS_SCORE:
0.4902
HELIX:
0.5163
FCONS_SCORE:
1.1365
RIG_SCORE:
0.7422
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R196H
TCGA-06-0648
GBM
TCGA
RRKKLERMY
DEG_APCC_DBOX_1
0.8244
p.R196H
DO11022
GBM
ICGC
RRKKLERMY
DEG_APCC_DBOX_1
0.8244
p.R201S
TCGA-58-8386
LUSC
TCGA
RRKKLERMY
DEG_APCC_DBOX_1
0.6316
p.R201S
DO45537
LUSC
ICGC
RRKKLERMY
DEG_APCC_DBOX_1
0.6316
p.R207C
TCGA-B5-A3FC
UCEC
TCGA
RRKKLERMY
DEG_APCC_DBOX_1
0.2222
p.R207C
DO41871
UCEC
ICGC
RRKKLERMY
DEG_APCC_DBOX_1
0.2222
p.R195H
TCGA-FI-A2D5
UCEC
TCGA
RRKKLERMY
DEG_APCC_DBOX_1
0.7133
p.R195H
DO41331
UCEC
ICGC
RRKKLERMY
DEG_APCC_DBOX_1
0.7133
p.G198A
DO15238
HNSC
ICGC
RRKKLERMY
DEG_APCC_DBOX_1
0.754
p.N193H
DO223831
KIRC
ICGC
RRKKLERMY
DEG_APCC_DBOX_1
0.2778
p.S204R
DO229031
LICA
ICGC
RRKKLERMY
DEG_APCC_DBOX_1
0.75
p.V205I
SIDM00997
Thyroid Gland Carcinoma
GDSC
RRKKLERMY
DEG_APCC_DBOX_1
0.2778
p.V205I
ACH-001306
Thyroid Cancer
CCLE
RRKKLERMY
DEG_APCC_DBOX_1
0.2778
p.V205I
8305C
thyroid
COSMIC
RRKKLERMY
DEG_APCC_DBOX_1
0.2778
Drug responses associated with NSMF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRKKLERMY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6X4W1
NMDA receptor synaptonuclear signaling and neuronal migration factor
DEG_APCC_DBOX_1
195:203
RRKKLERMY
APC,CDC20,FZR1
0.8814
More...