DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRKLLSPVS
Uniprot ID:
O75335
Source protein:
Liprin-alpha-4
Source gene:
PPFIA4
Class:
DEG_APCC_DBOX_1
Location:
676:684
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9939
ASA_SCORE:
101.2778
COIL:
0.7331
CONS_SCORE:
0.222
DSS_SCORE:
0.5942
HELIX:
0.2269
FCONS_SCORE:
1.0863
RIG_SCORE:
0.6857
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H687Y
TCGA-BH-A0AZ
BRCA
TCGA
RRKLLSPVS
DEG_APCC_DBOX_1
0.25
p.T667I
DO45205
LIRI
ICGC
RRKLLSPVS
DEG_APCC_DBOX_1
0.0833
p.R685L
DO26200
LUAD
ICGC
RRKLLSPVS
DEG_APCC_DBOX_1
0.3056
p.R685W
DO220886
MELA
ICGC
RRKLLSPVS
DEG_APCC_DBOX_1
0.3056
p.R689Q
DO37719
SKCM
ICGC
RRKLLSPVS
DEG_APCC_DBOX_1
0.1944
p.R689Q
H513
pleura
COSMIC
RRKLLSPVS
DEG_APCC_DBOX_1
0.1944
p.M666I
DO41752
UCEC
ICGC
RRKLLSPVS
DEG_APCC_DBOX_1
0.0556
p.P669L
DO41235
UCEC
ICGC
RRKLLSPVS
DEG_APCC_DBOX_1
0.1389
p.R690Q
SIDM00114
Non-Small Cell Lung Carcinoma
GDSC
RRKLLSPVS
DEG_APCC_DBOX_1
0.1667
p.R690Q
H513
pleura
COSMIC
RRKLLSPVS
DEG_APCC_DBOX_1
0.1667
p.L673I
SIDM00726
Non-Small Cell Lung Carcinoma
GDSC
RRKLLSPVS
DEG_APCC_DBOX_1
0.25
p.L673I
ACH-000875
Lung Cancer
CCLE
RRKLLSPVS
DEG_APCC_DBOX_1
0.25
p.L673I
NCI-H2347
lung
COSMIC
RRKLLSPVS
DEG_APCC_DBOX_1
0.25
p.H676R
SIDM01706
Hodgkin's Lymphoma
GDSC
RRKLLSPVS
DEG_APCC_DBOX_1
0.8244
p.H676R
ACH-001093
Non-Cancerous
CCLE
RRKLLSPVS
DEG_APCC_DBOX_1
0.8244
p.E688K
SIDM01640
Acute Myeloid Leukemia
GDSC
RRKLLSPVS
DEG_APCC_DBOX_1
0.2222
p.E688K
ACH-000602
Leukemia
CCLE
RRKLLSPVS
DEG_APCC_DBOX_1
0.2222
p.L672I
NCI-H2347
lung
COSMIC
RRKLLSPVS
DEG_APCC_DBOX_1
0.2222
Drug responses associated with PPFIA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRKLLSPVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75335
Liprin-alpha-4
DEG_APCC_DBOX_1
676:684
RRKLLSPVS
APC,CDC20,FZR1
0.9939
More...