DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRKTLVSMP
Uniprot ID:
P48382
Source protein:
DNA-binding protein RFX5
Source gene:
RFX5
Class:
DEG_APCC_DBOX_1
Location:
165:173
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9161
ASA_SCORE:
75.5111
COIL:
0.6509
CONS_SCORE:
0.7616
DSS_SCORE:
0.4115
HELIX:
0.0084
FCONS_SCORE:
0.9796
RIG_SCORE:
0.753
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S162C
TCGA-A2-A3Y0
BRCA
TCGA
RRKTLVSMP
DEG_APCC_DBOX_1
0.25
p.S162C
DO44273
BRCA
ICGC
RRKTLVSMP
DEG_APCC_DBOX_1
0.25
p.D179N
TCGA-AO-A0JC
BRCA
TCGA
RRKTLVSMP
DEG_APCC_DBOX_1
0.1667
p.D179N
DO5277
BRCA
ICGC
RRKTLVSMP
DEG_APCC_DBOX_1
0.1667
p.K181N
TCGA-D3-A2JP
SKCM
TCGA
RRKTLVSMP
DEG_APCC_DBOX_1
0.2222
p.K181N
DO47407
SKCM
ICGC
RRKTLVSMP
DEG_APCC_DBOX_1
0.2222
p.G155S
TCGA-DY-A0XA
READ
TCGA
RRKTLVSMP
DEG_APCC_DBOX_1
0.0556
p.G155S
DO37026
READ
ICGC
RRKTLVSMP
DEG_APCC_DBOX_1
0.0556
p.M172V
TCGA-L5-A4OT
ESCA
TCGA
RRKTLVSMP
DEG_APCC_DBOX_1
0.6097
p.M172V
SIDM00957
Colorectal Carcinoma
GDSC
RRKTLVSMP
DEG_APCC_DBOX_1
0.6097
p.M172V
SIDM00653
Small Cell Lung Carcinoma
GDSC
RRKTLVSMP
DEG_APCC_DBOX_1
0.6097
p.M172V
ACH-000350
Colon/Colorectal Cancer
CCLE
RRKTLVSMP
DEG_APCC_DBOX_1
0.6097
p.M172V
ACH-000514
Lung Cancer
CCLE
RRKTLVSMP
DEG_APCC_DBOX_1
0.6097
p.M172V
NCI-H1092
lung
COSMIC
RRKTLVSMP
DEG_APCC_DBOX_1
0.6097
p.M172V
COLO-678
large_intestine
COSMIC
RRKTLVSMP
DEG_APCC_DBOX_1
0.6097
p.C160R
SIDM01090
Colorectal Carcinoma
GDSC
RRKTLVSMP
DEG_APCC_DBOX_1
0.1944
p.C160R
ACH-000943
Colon/Colorectal Cancer
CCLE
RRKTLVSMP
DEG_APCC_DBOX_1
0.1944
p.C160R
RKO
large_intestine
COSMIC
RRKTLVSMP
DEG_APCC_DBOX_1
0.1944
p.R166S
SIDM00006
Other Solid Cancers
GDSC
RRKTLVSMP
DEG_APCC_DBOX_1
0.7427
p.R166S
ACH-001552
Skin Cancer
CCLE
RRKTLVSMP
DEG_APCC_DBOX_1
0.7427
p.R166S
MCC26
skin
COSMIC
RRKTLVSMP
DEG_APCC_DBOX_1
0.7427
p.S183P
SIDM01502
Endometrial Carcinoma
GDSC
RRKTLVSMP
DEG_APCC_DBOX_1
0.5
Drug responses associated with RFX5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRKTLVSMP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48382
DNA-binding protein RFX5
DEG_APCC_DBOX_1
165:173
RRKTLVSMP
APC,CDC20,FZR1
0.9161
More...