DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRLDLSHLR
Uniprot ID:
Q92888
Source protein:
Rho guanine nucleotide exchange factor 1
Source gene:
ARHGEF1
Class:
DEG_APCC_DBOX_1
Location:
620:628
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.731
ASA_SCORE:
79.1444
COIL:
0.4526
CONS_SCORE:
0.4798
DSS_SCORE:
0.2791
HELIX:
0.5164
FCONS_SCORE:
1.023
RIG_SCORE:
0.7596
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E625D
TCGA-AJ-A3BH
UCEC
TCGA
RRLDLSHLR
DEG_APCC_DBOX_1
0.6758
p.R622C
TCGA-QG-A5Z2
COAD
TCGA
RRLDLSHLR
DEG_APCC_DBOX_1
0.8301
p.R622C
ACH-001610
Brain Cancer
CCLE
RRLDLSHLR
DEG_APCC_DBOX_1
0.8301
p.R622S
TCGA-VS-A9UO
CESC
TCGA
RRLDLSHLR
DEG_APCC_DBOX_1
0.7427
p.Q629H
DO48386
BLCA
ICGC
RRLDLSHLR
DEG_APCC_DBOX_1
0.3056
p.L621P
DO222492
COCA
ICGC
RRLDLSHLR
DEG_APCC_DBOX_1
0.7582
p.S618I
DO228974
LICA
ICGC
RRLDLSHLR
DEG_APCC_DBOX_1
0.2778
p.G634V
DO229035
LICA
ICGC
RRLDLSHLR
DEG_APCC_DBOX_1
0.1667
p.K621N
DO26445
LUSC
ICGC
RRLDLSHLR
DEG_APCC_DBOX_1
0.6918
p.L637P
SIDM01951
Colorectal Carcinoma
GDSC
RRLDLSHLR
DEG_APCC_DBOX_1
0.0833
p.R636C
SIDM00388
B-Cell Non-Hodgkin's Lymphoma
GDSC
RRLDLSHLR
DEG_APCC_DBOX_1
0.1111
p.R636C
ACH-002272
Lymphoma
CCLE
RRLDLSHLR
DEG_APCC_DBOX_1
0.1111
p.R636C
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
RRLDLSHLR
DEG_APCC_DBOX_1
0.1111
p.L614V
ACH-001677
Lymphoma
CCLE
RRLDLSHLR
DEG_APCC_DBOX_1
0.1667
p.G632R
HEC-1
endometrium
COSMIC
RRLDLSHLR
DEG_APCC_DBOX_1
0.2222
p.R621C
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
RRLDLSHLR
DEG_APCC_DBOX_1
0.8301
p.T616M
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
RRLDLSHLR
DEG_APCC_DBOX_1
0.3333
p.R620W
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
RRLDLSHLR
DEG_APCC_DBOX_1
0.7523
p.K627T
LN-229
central_nervous_system
COSMIC
RRLDLSHLR
DEG_APCC_DBOX_1
0.7306
Drug responses associated with ARHGEF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRLDLSHLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92888
Rho guanine nucleotide exchange factor 1
DEG_APCC_DBOX_1
620:628
RRLDLSHLR
APC,CDC20,FZR1
0.731
More...