DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRLSLLALP
Uniprot ID:
Q9BZ72
Source protein:
Membrane-associated phosphatidylinositol transfer protein 2
Source gene:
PITPNM2
Class:
DEG_APCC_DBOX_1
Location:
869:877
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.962
ASA_SCORE:
92.2
COIL:
0.5812
CONS_SCORE:
0.3172
DSS_SCORE:
0.5912
HELIX:
0.3787
FCONS_SCORE:
1.0697
RIG_SCORE:
0.6933
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D860Y
TCGA-BC-A10Z
LIHC
TCGA
RRLSLLALP
DEG_APCC_DBOX_1
0.0833
p.D860Y
DO23043
LIHC
ICGC
RRLSLLALP
DEG_APCC_DBOX_1
0.0833
p.R870H
TCGA-NH-A5IV
COAD
TCGA
RRLSLLALP
DEG_APCC_DBOX_1
0.8244
p.R870H
DO49095
COAD
ICGC
RRLSLLALP
DEG_APCC_DBOX_1
0.8244
p.T883P
DO217788
BRCA
ICGC
RRLSLLALP
DEG_APCC_DBOX_1
0.1667
p.P859S
DO35723
PBCA
ICGC
RRLSLLALP
DEG_APCC_DBOX_1
0.0556
p.T882P
DO229257
THCA
ICGC
RRLSLLALP
DEG_APCC_DBOX_1
0.1944
p.D860N
ACH-000972
Endometrial/Uterine Cancer
CCLE
RRLSLLALP
DEG_APCC_DBOX_1
0.0833
p.P869L
NCI-H1693
lung
COSMIC
RRLSLLALP
DEG_APCC_DBOX_1
0.7582
Drug responses associated with PITPNM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRLSLLALP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BZ72
Membrane-associated phosphatidylinositol transfer protein 2
DEG_APCC_DBOX_1
869:877
RRLSLLALP
APC,CDC20,FZR1
0.962
More...