DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
RRNGLHTVP
Uniprot ID:
Q8WWT9
Source protein:
Solute carrier family 13 member 3
Source gene:
SLC13A3
Class:
DEG_APCC_DBOX_1
Location:
184:192
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8764
ASA_SCORE:
88.4889
COIL:
0.7046
CONS_SCORE:
0.3127
DSS_SCORE:
0.6061
HELIX:
0.2009
FCONS_SCORE:
1.1098
RIG_SCORE:
0.6887
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G187D
TCGA-AB-2808
LAML
TCGA
RRNGLHTVP
DEG_APCC_DBOX_1
0.6087
p.G187D
DO21487
LAML
ICGC
RRNGLHTVP
DEG_APCC_DBOX_1
0.6087
p.S176R
TCGA-CD-A4MG
STAD
TCGA
RRNGLHTVP
DEG_APCC_DBOX_1
0.1111
p.S176R
DO48009
STAD
ICGC
RRNGLHTVP
DEG_APCC_DBOX_1
0.1111
p.G187S
TCGA-CK-6746
COAD
TCGA
RRNGLHTVP
DEG_APCC_DBOX_1
0.5882
p.G187S
DO7938
COAD
ICGC
RRNGLHTVP
DEG_APCC_DBOX_1
0.5882
p.R184G
TCGA-D8-A1XF
BRCA
TCGA
RRNGLHTVP
DEG_APCC_DBOX_1
0.6457
p.S200N
TCGA-DX-AB2L
SARC
TCGA
RRNGLHTVP
DEG_APCC_DBOX_1
0.1111
p.P198S
DO8264
COAD
ICGC
RRNGLHTVP
DEG_APCC_DBOX_1
0.1667
p.G184E
DO219918
DLBC
ICGC
RRNGLHTVP
DEG_APCC_DBOX_1
0.7199
p.T183I
DO222837
MELA
ICGC
RRNGLHTVP
DEG_APCC_DBOX_1
0.3056
p.K182M
DO51517
PACA
ICGC
RRNGLHTVP
DEG_APCC_DBOX_1
0.2778
p.L193M
DO220011
SARC
ICGC
RRNGLHTVP
DEG_APCC_DBOX_1
0.3056
p.G181V
DO229462
SKCA
ICGC
RRNGLHTVP
DEG_APCC_DBOX_1
0.25
p.G183S
DO229502
SKCA
ICGC
RRNGLHTVP
DEG_APCC_DBOX_1
0.3056
p.T183A
DO219481
SKCM
ICGC
RRNGLHTVP
DEG_APCC_DBOX_1
0.3056
p.L185M
DO41999
UCEC
ICGC
RRNGLHTVP
DEG_APCC_DBOX_1
0.711
p.T180A
SIDM01007
T-Lymphoblastic Leukemia
GDSC
RRNGLHTVP
DEG_APCC_DBOX_1
0.2222
p.T180A
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
RRNGLHTVP
DEG_APCC_DBOX_1
0.2222
p.G187A
SIDM01028
Esophageal Squamous Cell Carcinoma
GDSC
RRNGLHTVP
DEG_APCC_DBOX_1
0.6429
p.G187A
KYSE-410
oesophagus
COSMIC
RRNGLHTVP
DEG_APCC_DBOX_1
0.6429
p.E178D
SIDM00259
Neuroblastoma
GDSC
RRNGLHTVP
DEG_APCC_DBOX_1
0.1667
p.E178D
ACH-002278
Neuroblastoma
CCLE
RRNGLHTVP
DEG_APCC_DBOX_1
0.1667
p.E178D
NB10
autonomic_ganglia
COSMIC
RRNGLHTVP
DEG_APCC_DBOX_1
0.1667
p.A182T
SIDM00954
Breast Carcinoma
GDSC
RRNGLHTVP
DEG_APCC_DBOX_1
0.2778
p.E177K
ACH-001566
Skin Cancer
CCLE
RRNGLHTVP
DEG_APCC_DBOX_1
0.1389
p.G199D
GP5d
large_intestine
COSMIC
RRNGLHTVP
DEG_APCC_DBOX_1
0.1389
p.T184A
YT
haematopoietic_and_lymphoid_tissue
COSMIC
RRNGLHTVP
DEG_APCC_DBOX_1
0.7139
p.R180H
DU-4475
breast
COSMIC
RRNGLHTVP
DEG_APCC_DBOX_1
0.2222
p.G199V
NCI-H2342
lung
COSMIC
RRNGLHTVP
DEG_APCC_DBOX_1
0.1389
p.H191R
MSTO-211H
pleura
COSMIC
RRNGLHTVP
DEG_APCC_DBOX_1
0.8244
Drug responses associated with SLC13A3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRNGLHTVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WWT9
Solute carrier family 13 member 3
DEG_APCC_DBOX_1
184:192
RRNGLHTVP
APC,CDC20,FZR1
0.8764
More...