DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRNGLSRLC
Uniprot ID:
Q96RG2
Source protein:
PAS domain-containing serine/threonine-protein kinase
Source gene:
PASK
Class:
DEG_APCC_DBOX_1
Location:
50:58
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9908
ASA_SCORE:
87.4778
COIL:
0.7282
CONS_SCORE:
0.2861
DSS_SCORE:
0.3664
HELIX:
0.2233
FCONS_SCORE:
0.9965
RIG_SCORE:
0.7051
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L57I
TCGA-A4-A5XZ
KIRP
TCGA
RRNGLSRLC
DEG_APCC_DBOX_1
0.6063
p.L57I
DO44499
KIRP
ICGC
RRNGLSRLC
DEG_APCC_DBOX_1
0.6063
p.S40L
TCGA-EE-A2MR
SKCM
TCGA
RRNGLSRLC
DEG_APCC_DBOX_1
0.5
p.S40L
DO37819
SKCM
ICGC
RRNGLSRLC
DEG_APCC_DBOX_1
0.5
p.T62I
TCGA-GU-A42R
BLCA
TCGA
RRNGLSRLC
DEG_APCC_DBOX_1
0.2222
p.T62I
SIDM00963
Breast Carcinoma
GDSC
RRNGLSRLC
DEG_APCC_DBOX_1
0.2222
p.T62I
SIDM01699
Chondrosarcoma
GDSC
RRNGLSRLC
DEG_APCC_DBOX_1
0.2222
p.S42F
TCGA-W3-AA1V
SKCM
TCGA
RRNGLSRLC
DEG_APCC_DBOX_1
0.5556
p.S42F
DO51276
SKCM
ICGC
RRNGLSRLC
DEG_APCC_DBOX_1
0.5556
p.S49C
DO1071
BRCA
ICGC
RRNGLSRLC
DEG_APCC_DBOX_1
0.3056
p.S55C
DO233103
GACA
ICGC
RRNGLSRLC
DEG_APCC_DBOX_1
0.7541
p.R56K
DO11854
GBM
ICGC
RRNGLSRLC
DEG_APCC_DBOX_1
0.6126
p.T62K
ACH-001199
Colon/Colorectal Cancer
CCLE
RRNGLSRLC
DEG_APCC_DBOX_1
0.2222
p.L54F
ACH-001367
Neuroblastoma
CCLE
RRNGLSRLC
DEG_APCC_DBOX_1
0.6981
Drug responses associated with PASK mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRNGLSRLC
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96RG2
PAS domain-containing serine/threonine-protein kinase
DEG_APCC_DBOX_1
50:58
RRNGLSRLC
APC,CDC20,FZR1
0.9908
More...