DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RRPVHLD
Uniprot ID:
Q9H0D6
Source protein:
5'-3' exoribonuclease 2
Source gene:
XRN2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
805:811
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6777
ASA_SCORE:
95.9857
COIL:
0.7564
CONS_SCORE:
0.2492
DSS_SCORE:
0.457
HELIX:
0.1899
FCONS_SCORE:
0.8785
RIG_SCORE:
0.7717
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P797R
TCGA-CG-5728
STAD
TCGA
RRPVHLD
LIG_APCC_ABBAyCdc20_2
0.1111
p.G800D
TCGA-D1-A103
UCEC
TCGA
RRPVHLD
LIG_APCC_ABBAyCdc20_2
0.1944
p.D811G
TCGA-EO-A22U
UCEC
TCGA
RRPVHLD
LIG_APCC_ABBAyCdc20_2
0.7198
p.P798S
DO44045
BLCA
ICGC
RRPVHLD
LIG_APCC_ABBAyCdc20_2
0.1389
p.Q801H
DO222877
COCA
ICGC
RRPVHLD
LIG_APCC_ABBAyCdc20_2
0.2222
p.R819Q
DO52112
HNSC
ICGC
RRPVHLD
LIG_APCC_ABBAyCdc20_2
0.1111
p.A811S
DO229041
LICA
ICGC
RRPVHLD
LIG_APCC_ABBAyCdc20_2
0.7588
p.Q802P
DO48553
PAEN
ICGC
RRPVHLD
LIG_APCC_ABBAyCdc20_2
0.25
p.P797S
DO37432
SKCM
ICGC
RRPVHLD
LIG_APCC_ABBAyCdc20_2
0.1111
p.W817L
DO38404
STAD
ICGC
RRPVHLD
LIG_APCC_ABBAyCdc20_2
0.1667
p.R819W
DO38711
STAD
ICGC
RRPVHLD
LIG_APCC_ABBAyCdc20_2
0.1111
p.Q803H
DO219773
UCEC
ICGC
RRPVHLD
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with XRN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRPVHLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H0D6
5'-3' exoribonuclease 2
LIG_APCC_ABBAyCdc20_2
805:811
RRPVHLD
APC,CDC20,FZR1
0.6777
More...