DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRRELPALR
Uniprot ID:
Q8TCU5
Source protein:
Glutamate receptor ionotropic, NMDA 3A
Source gene:
GRIN3A
Class:
DEG_APCC_DBOX_1
Location:
1051:1059
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9967
ASA_SCORE:
108.5111
COIL:
0.8229
CONS_SCORE:
0.5713
DSS_SCORE:
0.6223
HELIX:
0.129
FCONS_SCORE:
1.231
RIG_SCORE:
0.7137
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1059Q
TCGA-76-6191
GBM
TCGA
RRRELPALR
DEG_APCC_DBOX_1
0.6218
p.R1059Q
TCGA-AA-3966
COAD
TCGA
RRRELPALR
DEG_APCC_DBOX_1
0.6218
p.R1059Q
DO10068
COAD
ICGC
RRRELPALR
DEG_APCC_DBOX_1
0.6218
p.R1059W
TCGA-BR-8360
STAD
TCGA
RRRELPALR
DEG_APCC_DBOX_1
0.7523
p.R1059W
DO47745
STAD
ICGC
RRRELPALR
DEG_APCC_DBOX_1
0.7523
p.A1065E
TCGA-CN-6994
HNSC
TCGA
RRRELPALR
DEG_APCC_DBOX_1
0.1667
p.A1065E
DO15398
HNSC
ICGC
RRRELPALR
DEG_APCC_DBOX_1
0.1667
p.P1050L
TCGA-F7-A624
HNSC
TCGA
RRRELPALR
DEG_APCC_DBOX_1
0.3056
p.P1050L
DO44440
HNSC
ICGC
RRRELPALR
DEG_APCC_DBOX_1
0.3056
p.E1054K
TCGA-QQ-A5V9
SARC
TCGA
RRRELPALR
DEG_APCC_DBOX_1
0.591
p.E1054K
DO220245
SARC
ICGC
RRRELPALR
DEG_APCC_DBOX_1
0.591
p.P1047S
DO1083
BRCA
ICGC
RRRELPALR
DEG_APCC_DBOX_1
0.2222
p.L1048F
DO220886
MELA
ICGC
RRRELPALR
DEG_APCC_DBOX_1
0.25
p.L1055F
DO36556
READ
ICGC
RRRELPALR
DEG_APCC_DBOX_1
0.6981
Drug responses associated with GRIN3A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRRELPALR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TCU5
Glutamate receptor ionotropic, NMDA 3A
DEG_APCC_DBOX_1
1051:1059
RRRELPALR
APC,CDC20,FZR1
0.9967
More...