DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRRKLERMR
Uniprot ID:
O75161
Source protein:
Nephrocystin-4
Source gene:
NPHP4
Class:
DEG_APCC_DBOX_1
Location:
912:920
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.986
ASA_SCORE:
102.3111
COIL:
0.0536
CONS_SCORE:
0.4537
DSS_SCORE:
0.5987
HELIX:
0.9468
FCONS_SCORE:
1.1995
RIG_SCORE:
0.7536
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R923H
TCGA-AD-A5EJ
COAD
TCGA
RRRKLERMR
DEG_APCC_DBOX_1
0.25
p.R923H
DO50090
COAD
ICGC
RRRKLERMR
DEG_APCC_DBOX_1
0.25
p.S921F
TCGA-DR-A0ZL
CESC
TCGA
RRRKLERMR
DEG_APCC_DBOX_1
0.3056
p.S921F
DO6344
CESC
ICGC
RRRKLERMR
DEG_APCC_DBOX_1
0.3056
p.G928E
TCGA-EB-A24D
SKCM
TCGA
RRRKLERMR
DEG_APCC_DBOX_1
0.1111
p.G928E
DO37440
SKCM
ICGC
RRRKLERMR
DEG_APCC_DBOX_1
0.1111
p.R918Q
DO233072
GACA
ICGC
RRRKLERMR
DEG_APCC_DBOX_1
0.6218
p.R906H
DO50979
LAML
ICGC
RRRKLERMR
DEG_APCC_DBOX_1
0.1667
p.R906H
SIDM00680
Colorectal Carcinoma
GDSC
RRRKLERMR
DEG_APCC_DBOX_1
0.1667
p.R906H
SIDM00308
Chronic Myelogenous Leukemia
GDSC
RRRKLERMR
DEG_APCC_DBOX_1
0.1667
p.R906H
SIDM00354
Squamous Cell Lung Carcinoma
GDSC
RRRKLERMR
DEG_APCC_DBOX_1
0.1667
p.R906H
SIDM00054
Pancreatic Carcinoma
GDSC
RRRKLERMR
DEG_APCC_DBOX_1
0.1667
p.R906H
SIDM00302
Other Solid Cancers
GDSC
RRRKLERMR
DEG_APCC_DBOX_1
0.1667
p.R906H
SIDM00381
Cervical Carcinoma
GDSC
RRRKLERMR
DEG_APCC_DBOX_1
0.1667
p.R906H
SIDM01511
Gastric Carcinoma
GDSC
RRRKLERMR
DEG_APCC_DBOX_1
0.1667
p.R906H
SIDM01451
Pancreatic Carcinoma
GDSC
RRRKLERMR
DEG_APCC_DBOX_1
0.1667
p.A927T
DO50970
LICA
ICGC
RRRKLERMR
DEG_APCC_DBOX_1
0.1389
p.K915R
DO229216
THCA
ICGC
RRRKLERMR
DEG_APCC_DBOX_1
0.6126
p.R912H
SIDM02013
Colorectal Carcinoma
GDSC
RRRKLERMR
DEG_APCC_DBOX_1
0.7133
p.R918W
SIDM00596
Endometrial Carcinoma
GDSC
RRRKLERMR
DEG_APCC_DBOX_1
0.7523
p.R918W
ACH-001517
Endometrial/Uterine Cancer
CCLE
RRRKLERMR
DEG_APCC_DBOX_1
0.7523
p.R918W
HEC-1
endometrium
COSMIC
RRRKLERMR
DEG_APCC_DBOX_1
0.7523
p.R914H
SIDM01321
Pancreatic Carcinoma
GDSC
RRRKLERMR
DEG_APCC_DBOX_1
0.7133
p.R914H
ACH-000307
Pancreatic Cancer
CCLE
RRRKLERMR
DEG_APCC_DBOX_1
0.7133
Drug responses associated with NPHP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRRKLERMR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75161
Nephrocystin-4
DEG_APCC_DBOX_1
912:920
RRRKLERMR
APC,CDC20,FZR1
0.986
More...