DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRRRLQKLE
Uniprot ID:
Q86TM6
Source protein:
E3 ubiquitin-protein ligase synoviolin
Source gene:
SYVN1
Class:
DEG_APCC_DBOX_1
Location:
604:612
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7755
ASA_SCORE:
112.7
COIL:
0.2608
CONS_SCORE:
0.2663
DSS_SCORE:
0.7075
HELIX:
0.7433
FCONS_SCORE:
1.1267
RIG_SCORE:
0.7252
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R607C
TCGA-PG-A5BC
UCEC
TCGA
RRRRLQKLE
DEG_APCC_DBOX_1
0.719
p.R607C
DO48171
UCEC
ICGC
RRRRLQKLE
DEG_APCC_DBOX_1
0.719
p.L607P
DO233732
GACA
ICGC
RRRRLQKLE
DEG_APCC_DBOX_1
0.7582
p.R606S
DO229019
LICA
ICGC
RRRRLQKLE
DEG_APCC_DBOX_1
0.6316
p.R605G
DO23496
LINC
ICGC
RRRRLQKLE
DEG_APCC_DBOX_1
0.7568
p.R605G
DO45053
LINC
ICGC
RRRRLQKLE
DEG_APCC_DBOX_1
0.7568
p.L611M
DO23330
LINC
ICGC
RRRRLQKLE
DEG_APCC_DBOX_1
0.5999
p.R606H
SIDM01943
Colorectal Carcinoma
GDSC
RRRRLQKLE
DEG_APCC_DBOX_1
0.7133
p.P614H
SIDM00120
Prostate Carcinoma
GDSC
RRRRLQKLE
DEG_APCC_DBOX_1
0.2778
p.P614H
ACH-000979
Prostate Cancer
CCLE
RRRRLQKLE
DEG_APCC_DBOX_1
0.2778
p.P614H
DU-145
prostate
COSMIC
RRRRLQKLE
DEG_APCC_DBOX_1
0.2778
p.L611P
SIDM00487
Colorectal Carcinoma
GDSC
RRRRLQKLE
DEG_APCC_DBOX_1
0.7582
p.L611P
ACH-000963
Colon/Colorectal Cancer
CCLE
RRRRLQKLE
DEG_APCC_DBOX_1
0.7582
p.L611P
CCK-81
large_intestine
COSMIC
RRRRLQKLE
DEG_APCC_DBOX_1
0.7582
p.A616T
SIDM00954
Breast Carcinoma
GDSC
RRRRLQKLE
DEG_APCC_DBOX_1
0.2222
p.A616T
COLO-824
breast
COSMIC
RRRRLQKLE
DEG_APCC_DBOX_1
0.2222
p.L610P
CCK-81
large_intestine
COSMIC
RRRRLQKLE
DEG_APCC_DBOX_1
0.7582
p.P613H
DU-145
prostate
COSMIC
RRRRLQKLE
DEG_APCC_DBOX_1
0.75
p.A615T
COLO-824
breast
COSMIC
RRRRLQKLE
DEG_APCC_DBOX_1
0.25
Drug responses associated with SYVN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRRRLQKLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86TM6
E3 ubiquitin-protein ligase synoviolin
DEG_APCC_DBOX_1
604:612
RRRRLQKLE
APC,CDC20,FZR1
0.7755
More...