DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRSPLDHLP
Uniprot ID:
P52954
Source protein:
Transcription factor LBX1
Source gene:
LBX1
Class:
DEG_APCC_DBOX_1
Location:
16:24
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9911
ASA_SCORE:
100.3889
COIL:
0.8379
CONS_SCORE:
0.5932
DSS_SCORE:
0.7837
HELIX:
0.1498
FCONS_SCORE:
1.1929
RIG_SCORE:
0.5977
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A27V
TCGA-BR-6452
STAD
TCGA
RRSPLDHLP
DEG_APCC_DBOX_1
0.25
p.A27V
DO38404
STAD
ICGC
RRSPLDHLP
DEG_APCC_DBOX_1
0.25
p.G12W
TCGA-G7-6795
KIRP
TCGA
RRSPLDHLP
DEG_APCC_DBOX_1
0.2222
p.G12W
DO20851
KIRP
ICGC
RRSPLDHLP
DEG_APCC_DBOX_1
0.2222
p.G7C
TCGA-K7-A5RF
LIHC
TCGA
RRSPLDHLP
DEG_APCC_DBOX_1
0.0833
p.G7C
DO52303
LIHC
ICGC
RRSPLDHLP
DEG_APCC_DBOX_1
0.0833
p.R17H
DO233245
GACA
ICGC
RRSPLDHLP
DEG_APCC_DBOX_1
0.8244
p.R16W
DO233709
GACA
ICGC
RRSPLDHLP
DEG_APCC_DBOX_1
0.7523
p.P25L
DO233838
GACA
ICGC
RRSPLDHLP
DEG_APCC_DBOX_1
0.3056
p.R17C
SIDM01088
Endometrial Carcinoma
GDSC
RRSPLDHLP
DEG_APCC_DBOX_1
0.8301
p.R17C
ACH-000965
Endometrial/Uterine Cancer
CCLE
RRSPLDHLP
DEG_APCC_DBOX_1
0.8301
p.S29P
ACH-001331
Head and Neck Cancer
CCLE
RRSPLDHLP
DEG_APCC_DBOX_1
0.1944
p.H22P
ACH-002267
Leukemia
CCLE
RRSPLDHLP
DEG_APCC_DBOX_1
0.6583
p.H22P
ACH-002360
Non-Cancerous
CCLE
RRSPLDHLP
DEG_APCC_DBOX_1
0.6583
Drug responses associated with LBX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRSPLDHLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P52954
Transcription factor LBX1
DEG_APCC_DBOX_1
16:24
RRSPLDHLP
APC,CDC20,FZR1
0.9911
More...