DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RRSSLNSIS
Uniprot ID:
Q14123
Source protein:
Dual specificity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
Source gene:
PDE1C
Class:
DEG_APCC_DBOX_1
Location:
466:474
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9963
ASA_SCORE:
96.1222
COIL:
0.8051
CONS_SCORE:
0.3523
DSS_SCORE:
0.6289
HELIX:
0.1653
FCONS_SCORE:
1.1418
RIG_SCORE:
0.6531
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S480Y
TCGA-53-7626
LUAD
TCGA
RRSSLNSIS
DEG_APCC_DBOX_1
0.1667
p.S480Y
DO23774
LUAD
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.1667
p.P474S
TCGA-D3-A8GI
SKCM
TCGA
RRSSLNSIS
DEG_APCC_DBOX_1
0.6752
p.P474S
DO222702
MELA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.6752
p.P474S
DO50284
SKCM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.6752
p.M482I
TCGA-D3-A8GO
SKCM
TCGA
RRSSLNSIS
DEG_APCC_DBOX_1
0.1111
p.M482I
TCGA-GN-A26C
SKCM
TCGA
RRSSLNSIS
DEG_APCC_DBOX_1
0.1111
p.M482I
DO37782
SKCM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.1111
p.M482I
DO51242
SKCM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.1111
p.V483D
TCGA-DA-A1IC
SKCM
TCGA
RRSSLNSIS
DEG_APCC_DBOX_1
0.0833
p.V483D
DO37430
SKCM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.0833
p.R464K
TCGA-EE-A29V
SKCM
TCGA
RRSSLNSIS
DEG_APCC_DBOX_1
0.2778
p.R464K
DO38006
SKCM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.2778
p.D463G
TCGA-EO-A22R
UCEC
TCGA
RRSSLNSIS
DEG_APCC_DBOX_1
0.25
p.D463G
DO42713
UCEC
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.25
p.E465K
TCGA-FR-A8YC
SKCM
TCGA
RRSSLNSIS
DEG_APCC_DBOX_1
0.3056
p.E465K
DO50301
SKCM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.3056
p.R478Q
TCGA-FS-A1ZZ
SKCM
TCGA
RRSSLNSIS
DEG_APCC_DBOX_1
0.2222
p.R478Q
TCGA-W3-AA1W
SKCM
TCGA
RRSSLNSIS
DEG_APCC_DBOX_1
0.2222
p.R478Q
DO228017
SKCA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.2222
p.R478Q
DO37412
SKCM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.2222
p.R478Q
DO51277
SKCM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.2222
p.D477Y
TCGA-KQ-A41N
BLCA
TCGA
RRSSLNSIS
DEG_APCC_DBOX_1
0.25
p.D477Y
DO223588
BLCA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.25
p.S475L
DO1285
BRCA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.3056
p.S475L
DO220857
MELA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.3056
p.D477N
DO51208
BRCA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.25
p.R467C
DO44295
CESC
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.8301
p.R467C
DO45513
LUSC
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.8301
p.T481P
DO6994
CLLE
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.1389
p.L475R
DO222790
COCA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.3056
p.K479T
DO233269
GACA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.3056
p.S468L
DO13863
GBM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.7667
p.S468L
DO13462
GBM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.7667
p.S468L
DO232224
PBCA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.7667
p.S468L
DO40884
UCEC
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.7667
p.S468L
DO41524
UCEC
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.7667
p.S468L
HEC-1
endometrium
COSMIC
RRSSLNSIS
DEG_APCC_DBOX_1
0.7667
p.S468W
DO14426
HNSC
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.7874
p.L470M
DO228206
LICA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.711
p.A484D
DO229031
LICA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.1667
p.D463E
DO229035
LICA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.25
p.C476R
DO231786
LINC
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.2778
p.Q465H
DO26590
LUSC
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.3056
p.V483F
DO26473
LUSC
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.0833
p.R480Q
DO45513
LUSC
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.1667
p.R480Q
DO222363
MELA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.1667
p.R480Q
DO37429
SKCM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.1667
p.V483A
DO222554
MELA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.0833
p.G464R
DO222710
MELA
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.2778
p.S472N
DO50291
SKCM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.7069
p.T460N
DO51271
SKCM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.1667
p.G464E
DO219481
SKCM
ICGC
RRSSLNSIS
DEG_APCC_DBOX_1
0.2778
p.K479R
ACH-000885
Ovarian Cancer
CCLE
RRSSLNSIS
DEG_APCC_DBOX_1
0.3056
p.K479R
TOV-21G
ovary
COSMIC
RRSSLNSIS
DEG_APCC_DBOX_1
0.3056
p.R460T
ACH-000975
Lung Cancer
CCLE
RRSSLNSIS
DEG_APCC_DBOX_1
0.1667
Drug responses associated with PDE1C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRSSLNSIS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14123
Dual specificity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
DEG_APCC_DBOX_1
466:474
RRSSLNSIS
APC,CDC20,FZR1
0.9963
More...