DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRSVHSE
Uniprot ID:
O15027
Source protein:
Protein transport protein Sec16A
Source gene:
SEC16A
Class:
LIG_APCC_ABBAyCdc20_2
Location:
1345:1351
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9649
ASA_SCORE:
88.8
COIL:
0.811
CONS_SCORE:
0.306
DSS_SCORE:
0.6272
HELIX:
0.1371
FCONS_SCORE:
0.7417
RIG_SCORE:
0.6291
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1348I
TCGA-AJ-A8CW
UCEC
TCGA
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.5965
p.V1348I
DO52654
MALY
ICGC
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.5965
p.V1348I
DO52400
UCEC
ICGC
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.5965
p.S1356I
TCGA-FI-A2D5
UCEC
TCGA
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.6389
p.S1356I
DO41331
UCEC
ICGC
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.6389
p.E1342K
TCGA-GN-A8LK
SKCM
TCGA
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.E1342K
DO51259
SKCM
ICGC
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.R1355W
TCGA-QQ-A8VF
SARC
TCGA
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.2222
p.R1355W
DO220258
SARC
ICGC
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.2222
p.A1360T
DO233898
GACA
ICGC
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R1345Q
DO228941
LICA
ICGC
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.7329
p.A1354E
DO229024
LICA
ICGC
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.R1346H
SIDM01110
Hepatocellular Carcinoma
GDSC
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.7133
p.R1346H
SK-HEP-1
liver
COSMIC
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.7133
p.S1347N
SIDM01608
Endometrial Carcinoma
GDSC
RRSVHSE
LIG_APCC_ABBAyCdc20_2
0.7069
Drug responses associated with SEC16A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRSVHSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15027
Protein transport protein Sec16A
LIG_APCC_ABBAyCdc20_2
1345:1351
RRSVHSE
APC,CDC20,FZR1
0.9649
More...