DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRTDLKLLR
Uniprot ID:
O00750
Source protein:
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta
Source gene:
PIK3C2B
Class:
DEG_APCC_DBOX_1
Location:
74:82
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7555
ASA_SCORE:
86.6889
COIL:
0.5721
CONS_SCORE:
0.3097
DSS_SCORE:
0.4853
HELIX:
0.3892
FCONS_SCORE:
0.8933
RIG_SCORE:
0.7767
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D88N
TCGA-A2-A0CL
BRCA
TCGA
RRTDLKLLR
DEG_APCC_DBOX_1
0.1667
p.D88N
DO2155
BRCA
ICGC
RRTDLKLLR
DEG_APCC_DBOX_1
0.1667
p.D77N
TCGA-A5-A0G2
UCEC
TCGA
RRTDLKLLR
DEG_APCC_DBOX_1
0.5821
p.D77N
DO41235
UCEC
ICGC
RRTDLKLLR
DEG_APCC_DBOX_1
0.5821
p.R82H
TCGA-AX-A0J1
UCEC
TCGA
RRTDLKLLR
DEG_APCC_DBOX_1
0.7133
p.R82H
TCGA-DF-A2KU
UCEC
TCGA
RRTDLKLLR
DEG_APCC_DBOX_1
0.7133
p.R82H
DO223286
UCEC
ICGC
RRTDLKLLR
DEG_APCC_DBOX_1
0.7133
p.R82H
DO41199
UCEC
ICGC
RRTDLKLLR
DEG_APCC_DBOX_1
0.7133
p.R75Q
TCGA-D1-A15X
UCEC
TCGA
RRTDLKLLR
DEG_APCC_DBOX_1
0.7329
p.R75Q
TCGA-FI-A2D5
UCEC
TCGA
RRTDLKLLR
DEG_APCC_DBOX_1
0.7329
p.R75Q
DO43274
UCEC
ICGC
RRTDLKLLR
DEG_APCC_DBOX_1
0.7329
p.R75Q
DO41331
UCEC
ICGC
RRTDLKLLR
DEG_APCC_DBOX_1
0.7329
p.R75Q
SIDM00293
Small Cell Lung Carcinoma
GDSC
RRTDLKLLR
DEG_APCC_DBOX_1
0.7329
p.R75Q
ACH-002052
Lung Cancer
CCLE
RRTDLKLLR
DEG_APCC_DBOX_1
0.7329
p.R75Q
LU-139
lung
COSMIC
RRTDLKLLR
DEG_APCC_DBOX_1
0.7329
p.G64V
TCGA-EE-A184
SKCM
TCGA
RRTDLKLLR
DEG_APCC_DBOX_1
0.0556
p.G64V
DO47442
SKCM
ICGC
RRTDLKLLR
DEG_APCC_DBOX_1
0.0556
p.A72E
DO228974
LICA
ICGC
RRTDLKLLR
DEG_APCC_DBOX_1
0.2778
p.P71Q
DO229032
LICA
ICGC
RRTDLKLLR
DEG_APCC_DBOX_1
0.25
p.P89L
DO222749
MELA
ICGC
RRTDLKLLR
DEG_APCC_DBOX_1
0.1389
p.R75W
SIDM00690
Head and Neck Carcinoma
GDSC
RRTDLKLLR
DEG_APCC_DBOX_1
0.8634
p.R75W
SIDM00879
Breast Carcinoma
GDSC
RRTDLKLLR
DEG_APCC_DBOX_1
0.8634
p.R75W
SIDM01133
Other Solid Cancers
GDSC
RRTDLKLLR
DEG_APCC_DBOX_1
0.8634
p.R75W
SIDM00138
Non-Small Cell Lung Carcinoma
GDSC
RRTDLKLLR
DEG_APCC_DBOX_1
0.8634
p.R75W
SIDM00785
Acute Myeloid Leukemia
GDSC
RRTDLKLLR
DEG_APCC_DBOX_1
0.8634
p.R75W
SIDM01409
Bladder Carcinoma
GDSC
RRTDLKLLR
DEG_APCC_DBOX_1
0.8634
p.A72V
SIDM00192
Colorectal Carcinoma
GDSC
RRTDLKLLR
DEG_APCC_DBOX_1
0.2778
p.A72V
ACH-000286
Colon/Colorectal Cancer
CCLE
RRTDLKLLR
DEG_APCC_DBOX_1
0.2778
Drug responses associated with PIK3C2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRTDLKLLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00750
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta
DEG_APCC_DBOX_1
74:82
RRTDLKLLR
APC,CDC20,FZR1
0.7555
More...