DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRTDLTVLV
Uniprot ID:
P19388
Source protein:
DNA-directed RNA polymerases I, II, and III subunit RPABC1
Source gene:
POLR2E
Class:
DEG_APCC_DBOX_1
Location:
54:62
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9667
ASA_SCORE:
54.5
COIL:
0.5367
CONS_SCORE:
0.5289
DSS_SCORE:
0.5911
HELIX:
0.0658
FCONS_SCORE:
1.1874
RIG_SCORE:
0.7372
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R52W
TCGA-BR-8284
STAD
TCGA
RRTDLTVLV
DEG_APCC_DBOX_1
0.2778
p.R52W
DO38491
STAD
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.2778
p.D57N
TCGA-DK-A1AC
BLCA
TCGA
RRTDLTVLV
DEG_APCC_DBOX_1
0.5821
p.D57N
DO514
BLCA
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.5821
p.P53L
TCGA-IB-7651
PAAD
TCGA
RRTDLTVLV
DEG_APCC_DBOX_1
0.3056
p.P53L
DO46657
PAAD
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.3056
p.Q71H
DO5808
BRCA
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.0833
p.R54W
DO230315
COCA
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.7523
p.S44F
DO229010
COCA
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.0556
p.S44F
DO229013
COCA
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.0556
p.S44F
DO229016
COCA
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.0556
p.S44F
DO229003
COCA
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.0556
p.S44F
DO229005
COCA
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.0556
p.R52Q
DO233881
GACA
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.2778
p.D46E
DO229037
LICA
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.1111
p.D67E
DO232073
ORCA
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.1944
p.D70Y
DO232924
PEME
ICGC
RRTDLTVLV
DEG_APCC_DBOX_1
0.1111
p.P48L
SIDM00945
Colorectal Carcinoma
GDSC
RRTDLTVLV
DEG_APCC_DBOX_1
0.1667
p.P48L
ACH-000895
Colon/Colorectal Cancer
CCLE
RRTDLTVLV
DEG_APCC_DBOX_1
0.1667
p.P48L
CL-34
large_intestine
COSMIC
RRTDLTVLV
DEG_APCC_DBOX_1
0.1667
p.V60M
SIDM01263
T-Lymphoblastic Leukemia
GDSC
RRTDLTVLV
DEG_APCC_DBOX_1
0.6097
Drug responses associated with POLR2E mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRTDLTVLV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P19388
DNA-directed RNA polymerases I, II, and III subunit RPABC1
DEG_APCC_DBOX_1
54:62
RRTDLTVLV
APC,CDC20,FZR1
0.9667
More...