DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RRTRLGSLS
Uniprot ID:
Q5SW79
Source protein:
Centrosomal protein of 170 kDa
Source gene:
CEP170
Class:
DEG_APCC_DBOX_1
Location:
1154:1162
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9922
ASA_SCORE:
104.6111
COIL:
0.9119
CONS_SCORE:
0.5861
DSS_SCORE:
0.5564
HELIX:
0.0524
FCONS_SCORE:
1.0728
RIG_SCORE:
0.6964
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1164C
TCGA-44-7662
LUAD
TCGA
RRTRLGSLS
DEG_APCC_DBOX_1
0.2778
p.Q1152R
TCGA-A6-2686
COAD
TCGA
RRTRLGSLS
DEG_APCC_DBOX_1
0.2778
p.Q1152E
TCGA-AC-A5XS
BRCA
TCGA
RRTRLGSLS
DEG_APCC_DBOX_1
0.2778
p.I1147V
TCGA-AO-A124
BRCA
TCGA
RRTRLGSLS
DEG_APCC_DBOX_1
0.1389
p.R1154L
TCGA-AP-A053
UCEC
TCGA
RRTRLGSLS
DEG_APCC_DBOX_1
0.7316
p.S1172Y
TCGA-AX-A05Z
UCEC
TCGA
RRTRLGSLS
DEG_APCC_DBOX_1
0.0556
p.S1172Y
TCGA-BS-A0UV
UCEC
TCGA
RRTRLGSLS
DEG_APCC_DBOX_1
0.0556
p.R1146W
TCGA-FI-A2D5
UCEC
TCGA
RRTRLGSLS
DEG_APCC_DBOX_1
0.1111
p.R1146W
ACH-000951
Lung Cancer
CCLE
RRTRLGSLS
DEG_APCC_DBOX_1
0.1111
p.R1146W
NCI-H2342
lung
COSMIC
RRTRLGSLS
DEG_APCC_DBOX_1
0.1111
p.S1165T
ACH-000139
Pancreatic Cancer
CCLE
RRTRLGSLS
DEG_APCC_DBOX_1
0.6944
p.R1169H
CML-T1
haematopoietic_and_lymphoid_tissue
COSMIC
RRTRLGSLS
DEG_APCC_DBOX_1
0.1389
p.I1168M
EN
endometrium
COSMIC
RRTRLGSLS
DEG_APCC_DBOX_1
0.1667
p.S1172N
IMR-5
autonomic_ganglia
COSMIC
RRTRLGSLS
DEG_APCC_DBOX_1
0.0556
p.R1160H
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
RRTRLGSLS
DEG_APCC_DBOX_1
0.8244
p.L1170M
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
RRTRLGSLS
DEG_APCC_DBOX_1
0.5556
p.R1150W
Raji
haematopoietic_and_lymphoid_tissue
COSMIC
RRTRLGSLS
DEG_APCC_DBOX_1
0.2222
p.L1159I
KURAMOCHI
ovary
COSMIC
RRTRLGSLS
DEG_APCC_DBOX_1
0.7174
p.S1153F
NCI-H1568
lung
COSMIC
RRTRLGSLS
DEG_APCC_DBOX_1
0.3056
Drug responses associated with CEP170 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRTRLGSLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5SW79
Centrosomal protein of 170 kDa
DEG_APCC_DBOX_1
1154:1162
RRTRLGSLS
APC,CDC20,FZR1
0.9922
More...