DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRVHLGSVE
Uniprot ID:
O60500
Source protein:
Nephrin
Source gene:
NPHS1
Class:
DEG_APCC_DBOX_1
Location:
495:503
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.643
ASA_SCORE:
59.6556
COIL:
0.2297
CONS_SCORE:
0.321
DSS_SCORE:
0.4975
HELIX:
0.027
FCONS_SCORE:
0.8023
RIG_SCORE:
0.7031
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K504I
TCGA-A5-A2K7
UCEC
TCGA
RRVHLGSVE
DEG_APCC_DBOX_1
0.3056
p.K504I
DO41271
UCEC
ICGC
RRVHLGSVE
DEG_APCC_DBOX_1
0.3056
p.F509L
TCGA-BS-A0UV
UCEC
TCGA
RRVHLGSVE
DEG_APCC_DBOX_1
0.1667
p.F509L
DO42793
UCEC
ICGC
RRVHLGSVE
DEG_APCC_DBOX_1
0.1667
p.E503D
DO222762
COCA
ICGC
RRVHLGSVE
DEG_APCC_DBOX_1
0.5647
p.S494L
DO14171
HNSC
ICGC
RRVHLGSVE
DEG_APCC_DBOX_1
0.3056
p.T486N
DO228952
LICA
ICGC
RRVHLGSVE
DEG_APCC_DBOX_1
0.0833
p.R496S
DO229008
LICA
ICGC
RRVHLGSVE
DEG_APCC_DBOX_1
0.7427
Drug responses associated with NPHS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRVHLGSVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60500
Nephrin
DEG_APCC_DBOX_1
495:503
RRVHLGSVE
APC,CDC20,FZR1
0.643
More...