DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RRVTLNTLQ
Uniprot ID:
Q13112
Source protein:
Chromatin assembly factor 1 subunit B
Source gene:
CHAF1B
Class:
DEG_APCC_DBOX_1
Location:
482:490
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6107
ASA_SCORE:
101.5556
COIL:
0.6927
CONS_SCORE:
0.258
DSS_SCORE:
0.6333
HELIX:
0.0956
FCONS_SCORE:
0.9347
RIG_SCORE:
0.736
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V484I
TCGA-B5-A3FC
UCEC
TCGA
RRVTLNTLQ
DEG_APCC_DBOX_1
0.5965
p.V484I
DO41871
UCEC
ICGC
RRVTLNTLQ
DEG_APCC_DBOX_1
0.5965
p.T488R
TCGA-CZ-4859
KIRC
TCGA
RRVTLNTLQ
DEG_APCC_DBOX_1
0.6765
p.T488R
DO18602
KIRC
ICGC
RRVTLNTLQ
DEG_APCC_DBOX_1
0.6765
p.P480Q
TCGA-DU-7298
LGG
TCGA
RRVTLNTLQ
DEG_APCC_DBOX_1
0.2778
p.P480Q
DO22679
LGG
ICGC
RRVTLNTLQ
DEG_APCC_DBOX_1
0.2778
p.L486V
DO233201
GACA
ICGC
RRVTLNTLQ
DEG_APCC_DBOX_1
0.6765
p.L486V
SIDM00112
Kidney Carcinoma
GDSC
RRVTLNTLQ
DEG_APCC_DBOX_1
0.6765
p.L486V
ACH-000428
Kidney Cancer
CCLE
RRVTLNTLQ
DEG_APCC_DBOX_1
0.6765
p.L486V
U031
kidney
COSMIC
RRVTLNTLQ
DEG_APCC_DBOX_1
0.6765
Drug responses associated with CHAF1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRVTLNTLQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13112
Chromatin assembly factor 1 subunit B
DEG_APCC_DBOX_1
482:490
RRVTLNTLQ
APC,CDC20,FZR1
0.6107
More...