DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RSDIFND
Uniprot ID:
Q68DH5
Source protein:
G-protein coupled receptor-associated protein LMBRD2
Source gene:
LMBRD2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
688:694
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9991
ASA_SCORE:
76.9143
COIL:
0.8044
CONS_SCORE:
0.3388
DSS_SCORE:
0.6822
HELIX:
0.1357
FCONS_SCORE:
1.1432
RIG_SCORE:
0.7628
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D690N
TCGA-34-5232
LUSC
TCGA
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.5821
p.D690N
DO27168
LUSC
ICGC
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.5821
p.S685L
TCGA-AA-3877
COAD
TCGA
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.6944
p.S685L
TCGA-EO-A22U
UCEC
TCGA
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.6944
p.S685L
DO7855
COAD
ICGC
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.6944
p.S685L
DO43755
UCEC
ICGC
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.6944
p.S685L
SIDM00193
Colorectal Carcinoma
GDSC
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.6944
p.S685L
ACH-000991
Colon/Colorectal Cancer
CCLE
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.6944
p.S685L
SNU-81
large_intestine
COSMIC
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.6944
p.D694N
DO234193
ESAD
ICGC
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.6932
p.R688H
DO233804
GACA
ICGC
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.8244
p.R682L
DO229032
LICA
ICGC
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.1667
p.G680D
DO51537
PACA
ICGC
RSDIFND
LIG_APCC_ABBAyCdc20_2
0.1111
Drug responses associated with LMBRD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RSDIFND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q68DH5
G-protein coupled receptor-associated protein LMBRD2
LIG_APCC_ABBAyCdc20_2
688:694
RSDIFND
APC,CDC20,FZR1
0.9991
More...